Commits · fdafd75928a5c0082136582ee722d007957002f9 · Kautsar, Satria / BiG-SCAPE · GitLab

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Nov 13, 2018
- Merge branch 'html_visualization' into 'master' · fdafd759
  Kautsar, Satria authored 6 years ago
  fdafd759
- Fix overview screen only shows output from 1 run in the case of multiple runs via --cutoffs · b1213f48
  Kautsar, Satria authored 6 years ago
  
  b1213f48
- Merge branch 'html_visualization' into 'master' · a993ac45
  Kautsar, Satria authored 6 years ago
  a993ac45
- Added requirements.txt for easier installation using pip / conda · 32090412
  Kautsar, Satria authored 6 years ago
  
  32090412
Nov 12, 2018
- Merge branch 'html_visualization' into 'master' · ee9fa662
  Kautsar, Satria authored 6 years ago
  ee9fa662
- HTML Visualization will now produce separate outputs for each cutoff specified in "--cutoff" · 19e84281
  Kautsar, Satria authored 6 years ago
  
  19e84281
Oct 05, 2018
- Bufgix: fixes problems with cutoff values · 97bfde2d
  Jorge Navarro Muñoz authored 6 years ago
  
  97bfde2d
Oct 01, 2018
- Input sanitation and update to included MIBiG BGCs · 48579954
  Jorge Navarro Muñoz authored 6 years ago
  48579954
Sep 07, 2018
- Expanded Readme · 07e28536
  Jorge Navarro Muñoz authored 6 years ago
  
  07e28536
Sep 03, 2018
- Minor bugfix: fixed checking values for GCC calling (thanks to Mohammad Alanjary) · 766696bb
  Jorge Navarro Muñoz authored 6 years ago
  
  766696bb
Aug 06, 2018
- Merge branch 'html_visualization' into 'master' · c788dc1f
  Kautsar, Satria authored 6 years ago
  c788dc1f
- Family tab now explicitly mentions Clan-related information · 48c8c274
  Kautsar, Satria authored 6 years ago
  
  48c8c274
- Verify that domtable is correctly formatted before skipping it · 0cb2ecc2
  Kautsar, Satria authored 6 years ago
  
  0cb2ecc2
- Add file to easily run BiG-SCAPE using a docker image (single use) · d65bd1a0
  Jorge Navarro Muñoz authored 6 years ago
  
  d65bd1a0
Aug 03, 2018
- change Dockerfile name · a1db4f4d
  Jorge Navarro Muñoz authored 6 years ago
  
  a1db4f4d
- Merge branch 'master' of https://git.wageningenur.nl/medema-group/BiG-SCAPE · 61f9766d
  Jorge Navarro Muñoz authored 6 years ago
  
  61f9766d
- Updated dockerfile · 31792e92
  Jorge Navarro Muñoz authored 6 years ago
  
  31792e92
Jun 19, 2018
- GCC: annotated GCF label instead of GCF number in the clans .tsv file · 86bd2cbc
  Jorge Navarro Muñoz authored 6 years ago
  
  86bd2cbc
Jun 05, 2018
- PARAMETER CHANGE: 'lcs' mode becomes 'glocal' and is now default · 1146bf36
  Jorge Navarro Muñoz authored 6 years ago
  1146bf36
May 23, 2018
- domain_whitelist: fixed situation where new line character was added to the pfam id · 05518eed
  Jorge Navarro Muñoz authored 7 years ago
  
  05518eed
- Merge branch 'html_visualization' into 'master' · c7aa896d
  Kautsar, Satria authored 7 years ago
  c7aa896d
- Genome accession parsing method now only considers "Organism" identifier... · 30f2843a
  Kautsar, Satria authored 7 years ago
  30f2843a
May 22, 2018
- New feature: domain whitelist · ddf670d0
  Jorge Navarro Muñoz authored 7 years ago
  ddf670d0
May 18, 2018
- Merge branch 'html_visualization' into 'master' · 98168087
  Kautsar, Satria authored 7 years ago
  98168087
- Added download button for downloading absence/presence table into a tab-separated tsv file · 32b0b8ec
  Kautsar, Satria authored 7 years ago
  
  32b0b8ec
May 04, 2018
- Merge branch 'html_visualization' into 'master' · a5bcbae5
  Kautsar, Satria authored 7 years ago
  a5bcbae5
- improve heatmap color scaling for mibig metadata · a53afcf5
  Kautsar, Satria authored 7 years ago
  
  a53afcf5
- Merge branch 'html_visualization' into 'master' · a5fb6ab5
  Kautsar, Satria authored 7 years ago
  a5fb6ab5
- GCF with MIBiG are now shown in the overview screen's heatmap · ec1b4c9a
  Kautsar, Satria authored 7 years ago
  
  ec1b4c9a
May 03, 2018
- Bugfix --mix + --mibig · 992b0c6a
  Jorge Navarro Muñoz authored 7 years ago
  992b0c6a
May 01, 2018
- Merge branch 'html_visualization' into 'master' · 5358f8fe
  Kautsar, Satria authored 7 years ago
  5358f8fe
- overview screen now correctly counts input & mibig bgcs · dc29be30
  Kautsar, Satria authored 7 years ago
  
  dc29be30
- Merge branch 'html_visualization' into 'master' · 58e454fe
  Kautsar, Satria authored 7 years ago
  58e454fe
- fix newick tree visualization error when GCF == 2 bgcs · a1cb6372
  Kautsar, Satria authored 7 years ago
  
  a1cb6372
Apr 30, 2018
- Compatible again with Python 2, new --label parameter, removed warning · 171276c4
  Jorge Navarro Muñoz authored 7 years ago
  171276c4
- Domain colors: added more precalculated colors · a2496179
  Jorge Navarro Muñoz authored 7 years ago
  
  a2496179
- Merge branch 'html_visualization' into 'master' · 36d954f8
  Kautsar, Satria authored 7 years ago
  36d954f8
- mibig bgcs are highlighted in the network · 2acdaf42
  Kautsar, Satria authored 7 years ago
  
  2acdaf42
- Merge branch 'html_visualization' into 'master' · 4d8c96bc
  Kautsar, Satria authored 7 years ago
  4d8c96bc
- Implemented loading screen (with html5 defer attribute) · 48287d86
  Kautsar, Satria authored 7 years ago
  
  48287d86