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PanTools, WUR Bioinformatics

HPC Deployment toolbox used at WUR for Anunna

Repository for Python raster GIS library with low memory requirements

This repository contains a couple of scripts to make living with the WUR git repo a bit easier. Feel free to add code, by forking, coding and creating a merge request.

Hugo website for the Open Science Community Wageningen (OSC-W) using GitLab Pages.

Template for WUR beamer presentations, based on http://www.petervanbeveren.eu/latex/

A simple template repository for python projects

Basic definition files for containers

A package that prepare video recordings to be used by deeplabcut (simple 2D/3D tracking, cropping and stitching). Then use deeplabcut to estimate the 2D coordinates of various bodyparts of a flying insect and fit a 3D skeleton to these 2D coordinates

Contains Instructions how to set up iRODS for sysadmins and training material for different user goups.

Postprocessing --

CNN methods that estimate the diameter of the crop, even when it's occluded.