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A collaborative space of the EJP Soil project for disseminating soil datasets

Het MNP model zelf.

PanTools, WUR Bioinformatics

Welcome to the central open-source repository of LPJmL at WUR.

A package that prepare video recordings to be used by deeplabcut (simple 2D/3D tracking, cropping and stitching). Then use deeplabcut to estimate the 2D coordinates of various bodyparts of a flying insect and fit a 3D skeleton to these 2D coordinates

This FAV-tracker aim to allow the recording of high resolution videos of flying insects by aiming the views of high speed cameras toward a flying insect while it is being tracked in real time (using Braid) by a set of lower speed cameras. The views of the high speed cameras are directed towards the flying insect using mirrors mounted on gimbals and placed in front of each high speed camera as well as focus controller used to automatically change the focus plane of each high speed cameras.

HPC Deployment toolbox used at WUR for Anunna

Basic definition files for containers

Workflows for automated and systematic image analysis