FSPM_BASIC model. Simulation of above and below ground plant growth and architectural development, driven by intra- and interspecific competition for light and nutrients.

pipeline for annotation of functional amplicons targeting BGC domains

Happy - haplotype inference in polyploid species

Assorted genomic analysis pipelines

Biosynthetic Genes Similarity Clustering and Prospecting Engine.

Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard Index of domain types, Domain Sequence Similarity the Adjacency Index)

Seq2species fork adapted to my thesis

Die project bevat diverse documentatie en scripts gerelateerd aan het Model for Nature Policy (MNP). De broncode van MNP zelf wordt hier expliciet niet aangeboden.

project for testing code and messing around

semi-supervised FRET event detectiton using HMMs

project for testing code and messing around

MATLAB-based application used to analyze the structural identifiability of ODE based models