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Kautsar, Satria's avatar
Merge branch 'html_visualization' into 'master'
Kautsar, Satria authored 
Genome accession parsing method now only considers "Organism" identifier within…

See merge request medema-group/BiG-SCAPE!36
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Name Last commit Last update
Annotated_MIBiG_reference
html_template
ArrowerSVG.py
BiG-SCAPE CORASON Workflow.png
Dockerfile.bin
LICENSE
README.md
anchor_domains.txt
bigscape.py
domain_whitelist.txt
domains_color_file.tsv
functions.py
README.md

BiG-SCAPE

BiG-SCAPE (Biosynthetic Gene Similarity Clustering and Prospecting Engine) is a Python script that calculates a distance matrix between groups of genes. In particular, BiG-SCAPE has been built with the aim of analyzing Biosynthetic Gene Clusters, which encode the pathways for Secondary Metabolites.

BiG-SCAPE works by predicting and comparing conserved domains found in the proteins encoded in the gene clusters.

This comparison allows to form a distance matrix that can be used to group similar BGCs automatically.

Learn more about BiG-SCAPE in the wiki.

![](BiG-SCAPE CORASON Workflow.png)