Commits · 61f9766d20d1939225240624a1f61aea80bbe334 · Kautsar, Satria / BiG-SCAPE · GitLab

Snippets Groups Projects

Aug 03, 2018
- Merge branch 'master' of https://git.wageningenur.nl/medema-group/BiG-SCAPE · 61f9766d
  Jorge Navarro Muñoz authored 6 years ago
  
  61f9766d
- Updated dockerfile · 31792e92
  Jorge Navarro Muñoz authored 6 years ago
  
  31792e92
Jun 19, 2018
- GCC: annotated GCF label instead of GCF number in the clans .tsv file · 86bd2cbc
  Jorge Navarro Muñoz authored 6 years ago
  
  86bd2cbc
Jun 05, 2018
- PARAMETER CHANGE: 'lcs' mode becomes 'glocal' and is now default · 1146bf36
  Jorge Navarro Muñoz authored 6 years ago
  1146bf36
May 23, 2018
- domain_whitelist: fixed situation where new line character was added to the pfam id · 05518eed
  Jorge Navarro Muñoz authored 7 years ago
  
  05518eed
- Merge branch 'html_visualization' into 'master' · c7aa896d
  Kautsar, Satria authored 7 years ago
  c7aa896d
- Genome accession parsing method now only considers "Organism" identifier... · 30f2843a
  Kautsar, Satria authored 7 years ago
  30f2843a
May 22, 2018
- New feature: domain whitelist · ddf670d0
  Jorge Navarro Muñoz authored 7 years ago
  ddf670d0
May 18, 2018
- Merge branch 'html_visualization' into 'master' · 98168087
  Kautsar, Satria authored 7 years ago
  98168087
- Added download button for downloading absence/presence table into a tab-separated tsv file · 32b0b8ec
  Kautsar, Satria authored 7 years ago
  
  32b0b8ec
May 04, 2018
- Merge branch 'html_visualization' into 'master' · a5bcbae5
  Kautsar, Satria authored 7 years ago
  a5bcbae5
- improve heatmap color scaling for mibig metadata · a53afcf5
  Kautsar, Satria authored 7 years ago
  
  a53afcf5
- Merge branch 'html_visualization' into 'master' · a5fb6ab5
  Kautsar, Satria authored 7 years ago
  a5fb6ab5
- GCF with MIBiG are now shown in the overview screen's heatmap · ec1b4c9a
  Kautsar, Satria authored 7 years ago
  
  ec1b4c9a
May 03, 2018
- Bugfix --mix + --mibig · 992b0c6a
  Jorge Navarro Muñoz authored 7 years ago
  992b0c6a
May 01, 2018
- Merge branch 'html_visualization' into 'master' · 5358f8fe
  Kautsar, Satria authored 7 years ago
  5358f8fe
- overview screen now correctly counts input & mibig bgcs · dc29be30
  Kautsar, Satria authored 7 years ago
  
  dc29be30
- Merge branch 'html_visualization' into 'master' · 58e454fe
  Kautsar, Satria authored 7 years ago
  58e454fe
- fix newick tree visualization error when GCF == 2 bgcs · a1cb6372
  Kautsar, Satria authored 7 years ago
  
  a1cb6372
Apr 30, 2018
- Compatible again with Python 2, new --label parameter, removed warning · 171276c4
  Jorge Navarro Muñoz authored 7 years ago
  171276c4
- Domain colors: added more precalculated colors · a2496179
  Jorge Navarro Muñoz authored 7 years ago
  
  a2496179
- Merge branch 'html_visualization' into 'master' · 36d954f8
  Kautsar, Satria authored 7 years ago
  36d954f8
- mibig bgcs are highlighted in the network · 2acdaf42
  Kautsar, Satria authored 7 years ago
  
  2acdaf42
- Merge branch 'html_visualization' into 'master' · 4d8c96bc
  Kautsar, Satria authored 7 years ago
  4d8c96bc
- Implemented loading screen (with html5 defer attribute) · 48287d86
  Kautsar, Satria authored 7 years ago
  
  48287d86
Apr 26, 2018
- Parameters: updated help for new default values · 5ab491fe
  Jorge Navarro Muñoz authored 7 years ago
  
  5ab491fe
Apr 13, 2018
- Merge branch 'html_visualization' into 'master' · adb08396
  Kautsar, Satria authored 7 years ago
  adb08396
- Fix bug when there is only 1 BGC in a class · 2dde10af
  Kautsar, Satria authored 7 years ago
  
  2dde10af
Apr 09, 2018
- CHANGES IN DEFAULT PARAMETERS · 15c0ce69
  Jorge Navarro Muñoz authored 7 years ago
  15c0ce69
- MIBiG mode bugfix · a59c1eb9
  Jorge Navarro Muñoz authored 7 years ago
  a59c1eb9
Apr 08, 2018
- Fixed bug from previous commit (using local test set...) · a9e647a2
  Jorge Navarro Muñoz authored 7 years ago
  
  a9e647a2
- Removes non-relevant BGCs in MIBiG mode and other fixes · 5118cacb
  Jorge Navarro Muñoz authored 7 years ago
  5118cacb
Apr 05, 2018
- Merge branch 'html_visualization' into 'master' · 2cf498a7
  Kautsar, Satria authored 7 years ago
  2cf498a7
- Update & bugfix heatmap visualization · a1de5d89
  Kautsar, Satria authored 7 years ago
  
  a1de5d89
- Merge branch 'html_visualization' into 'master' · 174850a2
  Kautsar, Satria authored 7 years ago
  174850a2
- Fix bug where GCF window stopped working · 0c9b9ce7
  Kautsar, Satria authored 7 years ago
  
  0c9b9ce7
Apr 04, 2018
- Merge branch 'html_visualization' into 'master' · 4a771752
  Kautsar, Satria authored 7 years ago
  4a771752
- Updated heatmap visualization · a9211d0e
  Kautsar, Satria authored 7 years ago
  
  a9211d0e
Apr 03, 2018
- Merge branch 'html_visualization' into 'master' · e1465354
  Kautsar, Satria authored 7 years ago
  e1465354
- Update heatmap visualization (todo: filter heatmap rows and columns to the top... · 5697872f
  Kautsar, Satria authored 7 years ago
  5697872f