add version 4.2.2 to pantools_v4

See merge request bioinformatics/pantools!175

clean CI/CD pipeline

See merge request bioinformatics/pantools!173

Update CI/CD end-to-end test

See merge request bioinformatics/pantools!169

Fix CI/CD pipeline

See merge request bioinformatics/pantools!172

changed genomeNumbersFile in pantools map for selectGenomes

See merge request bioinformatics/pantools!170

Replaced dead name with new name.

See merge request bioinformatics/pantools!171

consensus_tree checks for untrimmed hm nodes

See merge request bioinformatics/pantools!168

add default for -H in group_info

See merge request bioinformatics/pantools!166

Fix CI/CD pipeline

See merge request bioinformatics/pantools!167

Fixed core_accessory_unique_size.csv being referred to as...

See merge request bioinformatics/pantools!165

Fixed core_accessory_unique_size.csv being referred to as core_accessoryunique_size.csv in pangenome_growth.R

Release v4.2.1

See merge request bioinformatics/pantools!163

Update pantools version to 4.2.1

See merge request bioinformatics/pantools!162

Add badges to README

See merge request bioinformatics/pantools!115

Update readthedocs documentation

See merge request bioinformatics/pantools!160

Fix default settings for 'pantools group'

See merge request bioinformatics/pantools!161

Fix protein specific FastTree option

See merge request bioinformatics/pantools!157