Commits · master · bioinformatics / hecaton · GitLab

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Oct 28, 2022
- Added new location of Hecaton repository to README · a9497c95
  Wijfjes, Raul authored 2 years ago
  
  a9497c95
Apr 11, 2022
- Added output section to README · ec6701d0
  Wijfjes, Raul authored 3 years ago
  
  ec6701d0
Mar 21, 2022
- Updated Docker tag · bdad2ed0
  Wijfjes, Raul authored 3 years ago
  
  bdad2ed0
- Fixed tests · d169fc21
  Wijfjes, Raul authored 3 years ago
  
  View commits for tag v.0.5.1 v.0.5.1
  
  d169fc21
Jan 08, 2021
- Updated Docker tag · 5efce90c
  Wijfjes, Raul authored 4 years ago
  
  View commits for tag v0.5.0 v0.5.0
  
  5efce90c
- Added potentially missing dependency of hexdump · 96374ade
  Wijfjes, Raul authored 4 years ago
  
  96374ade
Nov 14, 2020
- Updated vcf_to_table.py and merge_vcf_files.py. Added nextflow script to add... · aeb7ff36
  Wijfjes, Raul authored 4 years ago
  aeb7ff36
Jun 23, 2020
- Added option to merge VCFs containing multiple samples per file · 65d15cf5
  Wijfjes, Raul authored 4 years ago
  
  65d15cf5
Apr 14, 2020
- Updated Dockerfile and requirements.yml files · 9ba85780
  Wijfjes, Raul authored 5 years ago
  
  View commits for tag v0.4.0 v0.4.0
  
  9ba85780
- Updated Dockerfile and requirements.yml files · 1e3b80be
  Wijfjes, Raul authored 5 years ago
  
  1e3b80be
- Fixed tests · 19649e02
  Wijfjes, Raul authored 5 years ago
  
  19649e02
- Fixed tests · e395d205
  Wijfjes, Raul authored 5 years ago
  
  e395d205
- Changed permissions of nextflow binary in Docker image · 1fe3303f
  Wijfjes, Raul authored 5 years ago
  
  1fe3303f
Mar 30, 2020
- Added more options to vcf_to_table.py · f82885e8
  Wijfjes, Raul authored 5 years ago
  
  f82885e8
Jan 09, 2020
- FILTER field is now correctly processed in vcf_to_table.py · 3428de6e
  Wijfjes, Raul authored 5 years ago
  
  3428de6e
Jan 08, 2020
- Added option to merge VCF files without genotyping using read depth and to... · f5d48447
  Wijfjes, Raul authored 5 years ago
  f5d48447
Dec 16, 2019
- Changed hash in Dockerfile · f71732ab
  Wijfjes, Raul authored 5 years ago
  
  View commits for tag v0.3.0 v0.3.0
  
  f71732ab
- Updated Docker image version number · 4274d571
  Wijfjes, Raul authored 5 years ago
  
  4274d571
- Fixed typo in documentation · 2dbd6875
  Wijfjes, Raul authored 5 years ago
  
  2dbd6875
- Updated version numbers of Hecaton nextflow scripts · 4c64e9b9
  Wijfjes, Raul authored 5 years ago
  
  4c64e9b9
- Added filtering script and fixed bugs · 1eb490b5
  Wijfjes, Raul authored 5 years ago
  
  1eb490b5
Nov 22, 2019
- Corrected link in documentation to old repository · 0ba88762
  Wijfjes, Raul authored 5 years ago
  
  0ba88762
- Added option to pull image from Docker Hub · 017d8b14
  Wijfjes, Raul authored 5 years ago
  
  017d8b14
Sep 20, 2019
- Fixed some docker issues with hecaton_no_align · b065e453
  Wijfjes, Raul authored 5 years ago
  
  View commits for tag v0.2.2 v0.2.2
  
  b065e453
- Fixed and tested hecaton_no_align.nf · 8a8bba7a
  Wijfjes, Raul authored 5 years ago
  
  8a8bba7a
Sep 05, 2019
- Corrected small typo in readme · f31e5059
  Wijfjes, Raul authored 5 years ago
  
  f31e5059
- Corrected minor typo in changelog · 22fdc0d5
  Wijfjes, Raul authored 5 years ago
  
  View commits for tag v0.2.1 v0.2.1
  
  22fdc0d5
- Corrected changelog · bdc4ee07
  Wijfjes, Raul authored 5 years ago
  
  bdc4ee07
Sep 04, 2019
- Updated changelog · 2f150ef4
  Wijfjes, Raul authored 5 years ago
  
  2f150ef4
- Added installation script and fixed bug with setting conda environments · d0c5e782
  Wijfjes, Raul authored 5 years ago
  
  d0c5e782
Aug 17, 2019
- Updated README · f9f9a7f1
  Wijfjes, Raul authored 5 years ago
  
  View commits for tag v0.2.0 v0.2.0
  
  f9f9a7f1
- Added missing parameter to functional script · df4db107
  Wijfjes, Raul authored 5 years ago
  
  df4db107
- Added merging script and Slurm config file · 4b75f0e0
  Wijfjes, Raul authored 5 years ago
  
  4b75f0e0
- Added the option to exclude certain chromosomes · 6a857caa
  Wijfjes, Raul authored 5 years ago
  
  6a857caa
Apr 25, 2019
- Added nextflow script which can run Hecaton using pregenerated BWA mem alignments · d48739a1
  Wijfjes, Raul authored 6 years ago
  
  d48739a1
Mar 16, 2019
- Updated links in CHANGELOG.md · 5d895c4b
  Wijfjes, Raul authored 6 years ago
  
  View commits for tag v0.1.0 v0.1.0
  
  5d895c4b
- Corrected links in CHANGELOG.md · 3a559fd0
  Wijfjes, Raul authored 6 years ago
  
  3a559fd0
- Initial release of Hecaton · a7435e90
  Wijfjes, Raul authored 6 years ago
  
  a7435e90
Mar 15, 2019
- Initial commit · de759412
  Smit, Sandra authored 6 years ago
  
  de759412