Skip to content
Snippets Groups Projects
Commit bdad2ed0 authored by Wijfjes, Raul's avatar Wijfjes, Raul
Browse files

Updated Docker tag

parent d169fc21
No related branches found
No related tags found
No related merge requests found
......@@ -5,6 +5,8 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
## Unreleased
### Fixed
- Updated Docker tags in tests
## [0.5.1] - 2022-03-21
### Fixed
......
......@@ -4,7 +4,7 @@ set -e
mkdir -p test_wd_docker && cd test_wd_docker && \
nextflow run -w functional_workdir -with-docker hecaton:v0.4.0 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton.nf \
nextflow run -w functional_workdir -with-docker hecaton:v0.5.1 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton.nf \
--genome_file ../tests/functional/test.fa \
--reads "../tests/functional/test{1,2}.fq.gz" \
--model_file ../models/random_forest_model_concat_A_thaliana_ColxCvi_O_sativa_Suijing18_coverage_10x_insertions_balanced_subsample.pkl \
......@@ -14,7 +14,7 @@ nextflow run -w functional_workdir -with-docker hecaton:v0.4.0 -c ../nextflow/ne
--output_dir test_o && \
echo "Functional test with non-empty input successful" && \
nextflow run -w functional_workdir_empty -with-docker hecaton:v0.4.0 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton.nf \
nextflow run -w functional_workdir_empty -with-docker hecaton:v0.5.1 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton.nf \
--genome_file ../tests/functional/test.fa \
--reads "../tests/functional/test_empty{1,2}.fq.gz" \
--model_file ../models/random_forest_model_concat_A_thaliana_ColxCvi_O_sativa_Suijing18_coverage_10x_insertions_balanced_subsample.pkl \
......@@ -24,7 +24,7 @@ nextflow run -w functional_workdir_empty -with-docker hecaton:v0.4.0 -c ../nextf
--output_dir test_o_empty && \
echo "Functional test with empty input successful" && \
nextflow run -w functional_workdir_no_align -with-docker hecaton:v0.4.0 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton_no_align.nf \
nextflow run -w functional_workdir_no_align -with-docker hecaton:v0.5.1 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton_no_align.nf \
--genome_file ../tests/functional/test.fa \
--bwa_bams "../tests/functional/test.bam" \
--model_file ../models/random_forest_model_concat_A_thaliana_ColxCvi_O_sativa_Suijing18_coverage_10x_insertions_balanced_subsample.pkl \
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment