From bdad2ed0bdff175ece5a8c7e46a5abd245198eb1 Mon Sep 17 00:00:00 2001 From: Raul Wijfjes <raul.wijfjes@wur.nl> Date: Mon, 21 Mar 2022 11:06:13 +0100 Subject: [PATCH] Updated Docker tag --- CHANGELOG.md | 2 ++ tests/functional_test_docker.sh | 6 +++--- 2 files changed, 5 insertions(+), 3 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 61e3dba..d69b628 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -5,6 +5,8 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). ## Unreleased +### Fixed +- Updated Docker tags in tests ## [0.5.1] - 2022-03-21 ### Fixed diff --git a/tests/functional_test_docker.sh b/tests/functional_test_docker.sh index 06f9374..53dc7b3 100644 --- a/tests/functional_test_docker.sh +++ b/tests/functional_test_docker.sh @@ -4,7 +4,7 @@ set -e mkdir -p test_wd_docker && cd test_wd_docker && \ -nextflow run -w functional_workdir -with-docker hecaton:v0.4.0 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton.nf \ +nextflow run -w functional_workdir -with-docker hecaton:v0.5.1 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton.nf \ --genome_file ../tests/functional/test.fa \ --reads "../tests/functional/test{1,2}.fq.gz" \ --model_file ../models/random_forest_model_concat_A_thaliana_ColxCvi_O_sativa_Suijing18_coverage_10x_insertions_balanced_subsample.pkl \ @@ -14,7 +14,7 @@ nextflow run -w functional_workdir -with-docker hecaton:v0.4.0 -c ../nextflow/ne --output_dir test_o && \ echo "Functional test with non-empty input successful" && \ -nextflow run -w functional_workdir_empty -with-docker hecaton:v0.4.0 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton.nf \ +nextflow run -w functional_workdir_empty -with-docker hecaton:v0.5.1 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton.nf \ --genome_file ../tests/functional/test.fa \ --reads "../tests/functional/test_empty{1,2}.fq.gz" \ --model_file ../models/random_forest_model_concat_A_thaliana_ColxCvi_O_sativa_Suijing18_coverage_10x_insertions_balanced_subsample.pkl \ @@ -24,7 +24,7 @@ nextflow run -w functional_workdir_empty -with-docker hecaton:v0.4.0 -c ../nextf --output_dir test_o_empty && \ echo "Functional test with empty input successful" && \ -nextflow run -w functional_workdir_no_align -with-docker hecaton:v0.4.0 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton_no_align.nf \ +nextflow run -w functional_workdir_no_align -with-docker hecaton:v0.5.1 -c ../nextflow/nextflow.config -resume ../nextflow/hecaton_no_align.nf \ --genome_file ../tests/functional/test.fa \ --bwa_bams "../tests/functional/test.bam" \ --model_file ../models/random_forest_model_concat_A_thaliana_ColxCvi_O_sativa_Suijing18_coverage_10x_insertions_balanced_subsample.pkl \ -- GitLab