Commits · master · Pronk, Lotte / Whokaryote

05 Jul, 2022 3 commits
- Put bash script in data dir · 39c7bb57
  lotte.pronk authored Jul 05, 2022
  
  39c7bb57
- minor fix · 822be4c4
  lotte.pronk authored Jul 05, 2022
  
  822be4c4
- Fixed a typo · 923c1c98
  lotte.pronk authored Jul 05, 2022
  
  923c1c98
04 Jul, 2022 4 commits
- Revert "changed location of get_euk_prok_fasta.sh to data" · 0d54f1f5
  Pronk, Lotte authored Jul 04, 2022
```
This reverts commit 8c372243.
```
  0d54f1f5
- changed location of get_euk_prok_fasta.sh to data · 5e1d9b79
  Pronk, Lotte authored Jul 04, 2022
  
  5e1d9b79
- Revert "changed location of get_euk_prok_fasta.sh to data" · 04de23ad
  Pronk, Lotte authored Jul 04, 2022
```
This reverts commit 8c372243.
```
  04de23ad
- changed location of get_euk_prok_fasta.sh to data · 8c372243
  Pronk, Lotte authored Jul 04, 2022
  
  8c372243
14 Jun, 2022 1 commit
- help page now shows usage correctly · 306543b8
  Pronk, Lotte authored Jun 14, 2022
  
  306543b8
25 May, 2022 2 commits
- Added citation info · 81727e16
  Pronk, Lotte authored May 25, 2022
  
  81727e16
- Added links to training and test data files. · 5b443119
  Pronk, Lotte authored May 25, 2022
  
  5b443119
17 Mar, 2022 4 commits
- Added instructions to install Whokaryote on Windows. · 8295f839
  Pronk, Lotte authored Mar 17, 2022
  
  8295f839
- Added instructions to install Whokaryote on Windows. · 82101e49
  Pronk, Lotte authored Mar 17, 2022
  
  82101e49
- Added instructions to install Whokaryote on Windows. · 538cc813
  Pronk, Lotte authored Mar 17, 2022
  
  538cc813
- Added instructions to install Whokaryote on Windows. · 0daaf84f
  Pronk, Lotte authored Mar 17, 2022
  
  0daaf84f
16 Mar, 2022 3 commits
- Added instructions to install Whokaryote on Windows. · b25b2336
  Pronk, Lotte authored Mar 16, 2022
  
  b25b2336
- minor changes · 9bbf9ddd
  Pronk, Lotte authored Mar 16, 2022
  
  9bbf9ddd
- minor changes · 6684c97c
  Pronk, Lotte authored Mar 16, 2022
  
  6684c97c
18 Feb, 2022 2 commits
- minor changes · cb91e1d5
  Pronk, Lotte authored Feb 18, 2022
  
  cb91e1d5
- minor change · 441ab127
  Pronk, Lotte authored Feb 18, 2022
  
  441ab127
17 Feb, 2022 7 commits
- minor change · 82a129f2
  Pronk, Lotte authored Feb 17, 2022
  
  82a129f2
- minor change · dff9e139
  Pronk, Lotte authored Feb 17, 2022
  
  dff9e139
- minor change · 49d75a63
  Pronk, Lotte authored Feb 17, 2022
  
  49d75a63
- minor change · 14a7a2e4
  Pronk, Lotte authored Feb 17, 2022
  
  14a7a2e4
- minor changes · fe8955d9
  Pronk, Lotte authored Feb 17, 2022
  
  fe8955d9
- Added RBS motif ratio as feature · 9fb61d34
  Pronk, Lotte authored Feb 17, 2022
  
  9fb61d34
- Added retrained models with RBS motif ratio per contig as a new feature. · 316eb8ec
  Pronk, Lotte authored Feb 17, 2022
  
  316eb8ec
24 Nov, 2021 6 commits
- Output dir is now created if it does not exist yet + Tiara multithreading option added. · fbf924da
  Pronk, Lotte authored Nov 24, 2021
  
  fbf924da
- Minor changes · e4f4af60
  Pronk, Lotte authored Nov 24, 2021
  
  e4f4af60
- Minor changes · 9ac01280
  Pronk, Lotte authored Nov 24, 2021
  
  9ac01280
- Minor changes · f53b6352
  Pronk, Lotte authored Nov 24, 2021
  
  f53b6352
- Minor changes · 05cef7f7
  Pronk, Lotte authored Nov 24, 2021
  
  05cef7f7
- Minor changes · 35a3716a
  Pronk, Lotte authored Nov 24, 2021
  
  35a3716a
22 Nov, 2021 1 commit
- Added explanation about FileNotFoundError (when no outdir is created beforehand) · a72f0dd5
  Pronk, Lotte authored Nov 22, 2021
  
  a72f0dd5
17 Nov, 2021 6 commits
- Output featuretable is now tab-separated (.tsv). Also fixed empty contig_header files. · 052334e3
  Pronk, Lotte authored Nov 17, 2021
  
  052334e3
- Tiara will now work with a minimum contig length of 1000 bp · a44e2cdd
  Pronk, Lotte authored Nov 17, 2021
  
  a44e2cdd
- minor update of README · 923c036a
  Pronk, Lotte authored Nov 17, 2021
  
  923c036a
- minor changes to output · 802cbd13
  Pronk, Lotte authored Nov 17, 2021
  
  802cbd13
- minor changes · 19ed910d
  Pronk, Lotte authored Nov 17, 2021
  
  19ed910d
- minor changes · 7a7cfe7d
  Pronk, Lotte authored Nov 17, 2021
  
  7a7cfe7d
10 Nov, 2021 1 commit
- minor changes · 98260b67
  Pronk, Lotte authored Nov 10, 2021
  
  98260b67