Explore projects
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Basic RMarkdown/hugo website for the Open Science Community Wageningen (OSC-W) using GitLab Pages.
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A Species Sensitivity Distribution for temperature induced mortality: operational online
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Biosynthetic Genes Similarity Clustering and Prospecting Engine.
Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard index, a modified Domain Duplicate Score and the Goodman-Kruskal gamma function)
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Series of scripts developed part of the Rationally designed microbiomes project.
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Rest application serving the monoliths images used in the World Soil Museum website.
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Biosynthetic Genes Similarity Clustering and Prospecting Engine.
Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard Index of domain types, Domain Sequence Similarity the Adjacency Index)
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using jupyter notebooks and nbgrader to partially automate exercise grading for the course geoengineering, and the design of a proposal for a final exam for the course geoengineering
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Biosynthetic Genes Similarity Clustering and Prospecting Engine.
Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard Index of domain types, Domain Sequence Similarity the Adjacency Index)
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R for microbial ecology tutorial code
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