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Dynamic Ecosystem Model Oosterschelde

Procedure voor het ontwikkelen van de 'windturbine zichtbaarheidskaart'.

Easily compute and visualise synteny between multiple genomes

R toolkit for working with variant data

In dit publieke project staan documenten waar we als functioneel beheer Osiris geen hosting voor hebben, maar die wel ergens een online plek nodig hebben. Hierin worden bijvoorbeeld afbeeldingen gehost die we in mededelingen vanuit Osiris versturen.

FLiTrak3D (or FLIT for “FLight Insect Tracker”) is a Python package that prepare video recordings to be used by DeepLabCut (simple 2D/3D tracking, cropping and stitching). Then use DeepLabCut to estimate the 2D coordinates of various bodyparts of a flying insect and fit a 3D skeleton to these 2D coordinates

Calculate the diversity of your gene clusters! Using hmmscan to find the pfam domains. Jaccard, DDS, GK as distance metrics including sequence similarity as a modifier. It outputs tab delimited network files that can be visualized in Cytoscape.

A script for retrieval of SMILES chemical data of compounds produced by Biosynthetic Gene Clusters. Data is gathered from the MIBiG repository (single package with all entries in JSON format)

Whole-cell biosensor array for early detection of mold contamination and mycotoxin risk prediction in maize

ACT project for the masters programme Geo-Information Science at Wageningen University & Research, conducted for the Dutch Ministry of Defence

This project is containing some code and data for the tutorial on 3D plant phenotyping at the Summerschool on Application of Machine Learning in Plant Sciences, 12–16 September 2022, Einsiedeln, Switzerland.

An automated pipeline to generate CADD scores.

Using non-invasive sensors to predict hypoglycaemic conditions as an alternative to invasive CGM

This repository contains three Jupyter notebooks where the impact of three types of grippers on three types of soft fruits is analyzed based on Vis-NIR spectra.

Add a sum function to the multiply.py.

My version of Jos's project