Draft: construct pangenome database from GFA
Related to !147, I would like to not only go from pantools_DB -> GFA
but also vice versa. This merge request collects my tries of doing that. It's marked as draft for now because I'm not sure if I'll use this code in the end.
TODO:
-
Fix kmer index -
Make working on cyclic graphs -
Check correctness on both small and large graphs
Edited by Workum, Dirk-Jan van