Commits · pantools_v4 · bioinformatics / PanTools · GitLab

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Feb 21, 2025
- Merge branch 'release_v4.3.3' into 'pantools_v4' · 4f365575
  Smit, Sandra authored 2 months ago
  View commits for tag v4.3.3 v4.3.3
  
  4f365575
- add testing the documentation to release steps · b57e0a2c
  Workum, Dirk-Jan van authored 2 months ago
  
  b57e0a2c
- create version 4.3.3 · d0e80f62
  Workum, Dirk-Jan van authored 2 months ago
  
  d0e80f62
- Merge branch 'reduce_memory_metrics' into 'develop' · efc17ffd
  Workum, Dirk-Jan van authored 2 months ago
  efc17ffd
- update changelog · 1e6fd5e4
  Workum, Dirk-Jan van authored 2 months ago
  
  1e6fd5e4
- Merge branch 'develop' into reduce_memory_metrics · a3e90e21
  Workum, Dirk-Jan van authored 2 months ago
  
  a3e90e21
Feb 20, 2025
- Merge branch 'feature/update-onthology-db-url-to-https' into 'develop' · 6a293ad0
  Workum, Dirk-Jan van authored 2 months ago
  6a293ad0
- fixed merge conflict · dbca8036
  Flege, Patrick authored 2 months ago
  
  dbca8036
- Merge branch 'feature/throw_exception_if_empty_homology_selection_msa' into 'develop' · ab345282
  Workum, Dirk-Jan van authored 2 months ago
  ab345282
- updated changelog again · ca1f1dd4
  Flege, Patrick authored 2 months ago
  
  ca1f1dd4
- updated changelog · 584a3059
  Flege, Patrick authored 2 months ago
  
  584a3059
- corrected typo commit · 6db9f8b4
  Flege, Patrick authored 2 months ago
  
  6db9f8b4
- Updated HTTP URL of onthology file to HTTPS · 4dbeb107
  Flege, Patrick authored 2 months ago
  
  4dbeb107
- Updated changelog again · df7eadcc
  Flege, Patrick authored 2 months ago
  
  df7eadcc
Feb 19, 2025
- updated changelog · 1370aa19
  Flege, Patrick authored 2 months ago
  
  1370aa19
- checked if homology-file was empty and potentially throws exception · 07d5d279
  Flege, Patrick authored 2 months ago
  
  07d5d279
Feb 18, 2025
- take longest transcript code outside of double transaction; only one should be used · d4155215
  Workum, Dirk-Jan van authored 2 months ago
  
  d4155215
- directly write to file instead of stringbuilder · 1e2e0111
  Workum, Dirk-Jan van authored 2 months ago
  
  1e2e0111
Feb 17, 2025
- write longest isoforms in batches to hopefully prevent excessive heap memory · 3e0cf118
  Workum, Dirk-Jan van authored 2 months ago
  
  3e0cf118
Feb 05, 2025
- Merge branch 'fix_npe_gene_classification' into 'develop' · 3b32a582
  Workum, Dirk-Jan van authored 3 months ago
  3b32a582
- update changelog · 9449d069
  Workum, Dirk-Jan van authored 3 months ago
  
  9449d069
Feb 04, 2025
- check if variable is null to prevent NPE during gene_classification · 1076a331
  Workum, Dirk-Jan van authored 3 months ago
  
  1076a331
Feb 03, 2025
- Merge branch 'clarify_error_group_info' into 'develop' · 886c4ab1
  Workum, Dirk-Jan van authored 3 months ago
  886c4ab1
Jan 08, 2025
- update changelog · cd85d8a5
  Workum, Dirk-Jan van authored 3 months ago
  
  cd85d8a5
- also show when node does not exist · 1f04f859
  Workum, Dirk-Jan van authored 3 months ago
  
  1f04f859
- throw error instead of exit 1 for group_info · 4e82587f
  Workum, Dirk-Jan van authored 3 months ago
  
  4e82587f
Dec 20, 2024
- Merge branch 'release_v4.3.2' into 'pantools_v4' · dd6fa6cd
  Workum, Dirk-Jan van authored 4 months ago
  View commits for tag v4.3.2 v4.3.2
  
  dd6fa6cd
- Merge branch 'release_v4.3.2' into 'develop' · e4cac545
  Workum, Dirk-Jan van authored 4 months ago
  e4cac545
- update version to v4.3.2 · 8a758dd6
  Workum, Dirk-Jan van authored 4 months ago
  
  8a758dd6
- Merge branch 'update_tutorial' into 'develop' · 934cbb5f
  Workum, Dirk-Jan van authored 4 months ago
  934cbb5f
- update tutorial part 4 · d901debc
  Workum, Dirk-Jan van authored 4 months ago
  
  d901debc
Dec 19, 2024
- Fixed last comments · 5ea5c855
  Flege, Patrick authored 4 months ago
  
  5ea5c855
- Updated snakemake version explicitly · d2242ee1
  Flege, Patrick authored 4 months ago
  
  d2242ee1
- Added pecto again, fixed unfinished section · 342b78a6
  Flege, Patrick authored 4 months ago
  
  342b78a6
- fixed linting error · 75a468ba
  Flege, Patrick authored 4 months ago
  
  75a468ba
- test commit live · ac3dfde3
  Flege, Patrick authored 4 months ago
  
  ac3dfde3
- Merge branch 'fix_unexpected_grouping_behavior' into 'develop' · 90ea877a
  Workum, Dirk-Jan van authored 4 months ago
  90ea877a
Dec 18, 2024
- Updated tutorial part 4 - Re-arragend setup of tutorial page · 8264099d
  Flege, Patrick authored 4 months ago
  
  8264099d
- Updated tutorial part 4 - removed specific mention of a_thaliana · 2691c3d3
  Flege, Patrick authored 4 months ago
  
  2691c3d3
Dec 17, 2024
- Updated tutorial part 4 · db545613
  Flege, Patrick authored 4 months ago
  
  db545613