Commits · 6db9f8b43c8f74117417484e76cc6b7c0842e68f · bioinformatics / PanTools · GitLab

Snippets Groups Projects

Feb 20, 2025
- corrected typo commit · 6db9f8b4
  Flege, Patrick authored 4 months ago
  
  6db9f8b4
- Updated HTTP URL of onthology file to HTTPS · 4dbeb107
  Flege, Patrick authored 4 months ago
  
  4dbeb107
Feb 05, 2025
- Merge branch 'fix_npe_gene_classification' into 'develop' · 3b32a582
  Workum, Dirk-Jan van authored 4 months ago
  3b32a582
- update changelog · 9449d069
  Workum, Dirk-Jan van authored 4 months ago
  
  9449d069
Feb 04, 2025
- check if variable is null to prevent NPE during gene_classification · 1076a331
  Workum, Dirk-Jan van authored 4 months ago
  
  1076a331
Feb 03, 2025
- Merge branch 'clarify_error_group_info' into 'develop' · 886c4ab1
  Workum, Dirk-Jan van authored 4 months ago
  886c4ab1
Jan 08, 2025
- update changelog · cd85d8a5
  Workum, Dirk-Jan van authored 5 months ago
  
  cd85d8a5
- also show when node does not exist · 1f04f859
  Workum, Dirk-Jan van authored 5 months ago
  
  1f04f859
- throw error instead of exit 1 for group_info · 4e82587f
  Workum, Dirk-Jan van authored 5 months ago
  
  4e82587f
Dec 20, 2024
- Merge branch 'release_v4.3.2' into 'develop' · e4cac545
  Workum, Dirk-Jan van authored 6 months ago
  e4cac545
- update version to v4.3.2 · 8a758dd6
  Workum, Dirk-Jan van authored 6 months ago
  
  8a758dd6
- Merge branch 'update_tutorial' into 'develop' · 934cbb5f
  Workum, Dirk-Jan van authored 6 months ago
  934cbb5f
- update tutorial part 4 · d901debc
  Workum, Dirk-Jan van authored 6 months ago
  
  d901debc
Dec 19, 2024
- Fixed last comments · 5ea5c855
  Flege, Patrick authored 6 months ago
  
  5ea5c855
- Updated snakemake version explicitly · d2242ee1
  Flege, Patrick authored 6 months ago
  
  d2242ee1
- Added pecto again, fixed unfinished section · 342b78a6
  Flege, Patrick authored 6 months ago
  
  342b78a6
- fixed linting error · 75a468ba
  Flege, Patrick authored 6 months ago
  
  75a468ba
- test commit live · ac3dfde3
  Flege, Patrick authored 6 months ago
  
  ac3dfde3
- Merge branch 'fix_unexpected_grouping_behavior' into 'develop' · 90ea877a
  Workum, Dirk-Jan van authored 6 months ago
  90ea877a
Dec 18, 2024
- Updated tutorial part 4 - Re-arragend setup of tutorial page · 8264099d
  Flege, Patrick authored 6 months ago
  
  8264099d
- Updated tutorial part 4 - removed specific mention of a_thaliana · 2691c3d3
  Flege, Patrick authored 6 months ago
  
  2691c3d3
Dec 17, 2024
- Updated tutorial part 4 · db545613
  Flege, Patrick authored 6 months ago
  
  db545613
- reversed change · daebc43c
  Flege, Patrick authored 6 months ago
  
  daebc43c
- Updated runtime statistics · be6e5be3
  Flege, Patrick authored 6 months ago
  
  be6e5be3
Dec 16, 2024
- Updated runtime statistics · a929ef46
  Flege, Patrick authored 6 months ago
  
  a929ef46
Dec 13, 2024
- remove unused command line params · 615431f8
  Flege, Patrick authored 6 months ago
  
  615431f8
- update changelog · 006a5e80
  Workum, Dirk-Jan van authored 6 months ago
  
  006a5e80
- remove is_similar_to relationships before performing new grouping · 9f2e0e8a
  Workum, Dirk-Jan van authored 6 months ago
  
  9f2e0e8a
- Fixed typos · beb01a04
  Smit, Sandra authored 6 months ago
  
  beb01a04
- marking is_similar_to relationships in functional annotations for future change · ee421721
  Workum, Dirk-Jan van authored 6 months ago
  
  ee421721
- add potential TODOs for fixing unexpected grouping behavior · 4c07c2cb
  Workum, Dirk-Jan van authored 6 months ago
  
  4c07c2cb
Dec 09, 2024
- Merge branch 'increase_allowed_minimum_runtime_mcl' into 'develop' · 7e3e14ff
  Workum, Dirk-Jan van authored 6 months ago
  7e3e14ff
Dec 06, 2024
- update changelog · 936e0d94
  Workum, Dirk-Jan van authored 6 months ago
  
  936e0d94
- increase time to get I/O to work for MCL to an hour, just in case · 510ee0e4
  Workum, Dirk-Jan van authored 6 months ago
  
  510ee0e4
Dec 03, 2024
- Merge branch 'fix_long_mcl_runtime' into 'develop' · 6ca566df
  Workum, Dirk-Jan van authored 6 months ago
  6ca566df
- make group splitting failure log warn level · f08b1ea1
  Workum, Dirk-Jan van authored 6 months ago
  
  f08b1ea1
- add calculation back for MCL runtime · fcad1e70
  Workum, Dirk-Jan van authored 6 months ago
  
  fcad1e70
Dec 02, 2024
- increase max runtime MCL to an hour for extreme cases (not tested what is... · 6218a53e
  Workum, Dirk-Jan van authored 6 months ago
  6218a53e
- Merge branch 'develop' into fix_long_mcl_runtime · 789e680c
  Workum, Dirk-Jan van authored 6 months ago
  
  789e680c
- Merge branch 'fix_cicd_end_to_end_error' into 'develop' · e81bda30
  Workum, Dirk-Jan van authored 6 months ago
  e81bda30