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Witjes, Lotte
advanced_bioinformatics
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TEST
v1 overlap duo finder with any length of the overlap
v1 Needle parser
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v1 returns the number of possible mRNAs modulo 1000000 that could have been translated to a given protein sequence
v1 GenBank parser using Bio Entrez efetch() to obtain GB files from input accession IDs
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v1 finds N-glycolysation motifs in given .txt file with uniprot IDs, returns access ID with indices of the N-glycolysation motifs
v1 program returns index and length of palindromes in a certain DNA sequence
v1 returns indices of specified motif in specified DNA sequence
v1 fastQ trimmer and quality reporter
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output2 info table from GenBank parser
output1 FASTA file from GenBank parser
example input merged GenBank files
v1 GenBank file parser
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v1 Returns all possible ORFS in all six frames of a DNA sequence
v1 translates a given RNA sequence into a protein sequence
v1 count point mutations between 2 sequences
v2 fixed jellyfish
v1 jellyfish
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v1 GCcontent
v1 reverse complement
v1 Transcribes DNA into RNA
v1 calculate c**2 from a and b
v1 counting nucleotides in DNA sequence
Uploaded answers for C2
Shell script for C1
Uploaded the answers of C1
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