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Commit c39a76c7 authored by Warris, Sven's avatar Warris, Sven
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Merge branch 'PE_RC_2023' into 'master'

Pe rc 2023

See merge request !3
parents f4345582 6b52572a
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1 merge request!3Pe rc 2023
...@@ -21,5 +21,5 @@ parallel, plot3D, randomForest, rgl, Rmpi, rpart, rpart.plot, snow, ...@@ -21,5 +21,5 @@ parallel, plot3D, randomForest, rgl, Rmpi, rpart, rpart.plot, snow,
dplyr, tidyverse, hablar dplyr, tidyverse, hablar
install.packages(c("ggplot2", "ggbeeswarm", "bench", "Rprof", "proftools", "profvis", "data.table", "bench", "curl", "pryr", "bigmemory", "biganalytics", "biglm", "knitr", "doParallel", "GGally", "numbers", "parallel", "plot3D", "randomForest", "rgl", "rpart", "rpart.plot", "snow", "dplyr", "tidyverse", "hablar", "rmarkdown")) install.packages(c("ggplot2", "ggbeeswarm", "bench", "proftools", "profvis", "data.table", "bench", "curl", "pryr", "bigmemory", "biganalytics", "biglm", "knitr", "doParallel", "GGally", "numbers", "parallel", "plot3D", "randomForest", "rgl", "rpart", "rpart.plot", "snow", "dplyr", "tidyverse", "hablar", "rmarkdown"))
...@@ -46,7 +46,7 @@ Location: *B8020, Orion, building number 103, Bronland 1, 6708 WH Wageningen*. P ...@@ -46,7 +46,7 @@ Location: *B8020, Orion, building number 103, Bronland 1, 6708 WH Wageningen*. P
* 12:30 Lunch * 12:30 Lunch
* 13:30 Profiling & efficient R programming (contd.) by Maikel Verouden * 13:30 Profiling & efficient R programming (contd.) by Maikel Verouden
* 15:00 Break * 15:00 Break
* 16:00 Reproducible research by Sven Warris * 15:30 Reproducible research by Sven Warris
* 17:00 Q&A & Closing day 1 * 17:00 Q&A & Closing day 1
### Friday, June 2 ### Friday, June 2
......
...@@ -12,6 +12,8 @@ output: beamer_presentation ...@@ -12,6 +12,8 @@ output: beamer_presentation
- Software engineer - Software engineer
- Lecturer and researcher Bioinformatics - Lecturer and researcher Bioinformatics
- Researcher @ Applied Bioinformatics (WUR) - Researcher @ Applied Bioinformatics (WUR)
- Coordinator data team NPEC
- Data steward @ Bioscience
- PhD low-cost high performance biocomputing - PhD low-cost high performance biocomputing
- Mostly Python, Java, Javascript, C++, R - Mostly Python, Java, Javascript, C++, R
...@@ -89,7 +91,7 @@ Examples: ...@@ -89,7 +91,7 @@ Examples:
Note: Note:
* You may have to install the GIT software for your Operating System. * You may have to install the GIT software for your Operating System.
* You may have to create an SSH-key (__ssh-keygen -t rsa -b 4096 -C "your_email@example.com"__)
# Notebook technologies # Notebook technologies
...@@ -210,6 +212,7 @@ It knits together the rendered code chunks with your text to make your final out ...@@ -210,6 +212,7 @@ It knits together the rendered code chunks with your text to make your final out
- _|_ (pipe-symbol) and _-_ to draw tables - _|_ (pipe-symbol) and _-_ to draw tables
- _#_, _##_, _###_ for three levels of headers - _#_, _##_, _###_ for three levels of headers
- Google 'markdown', 'R markdown', 'pandoc markdown' - Google 'markdown', 'R markdown', 'pandoc markdown'
- Ask ChatGPT: 'Provide an example of a table with 2 rows and 4 columns in R markdown'
- Create a table in markdown - Create a table in markdown
- Can you add data from R in your table? - Can you add data from R in your table?
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