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Created with Raphaël 2.2.013May20Apr9Feb723Nov5228Oct130Sep2916Jul15713Apr26Mar25Feb24171112Jan1010Dec9216Nov13121110929Octmanager syncmastermasterAssay fix and ngtax bumpimproved already demultiplexed files if library unavailable at the momentsyncINV changed3 letter type code addedsample folder structure addedtest syncremoval of a checkFailure to download should not result in a full stopsmall fixes on filesdisable dna assay?move SRA download to when the assay is being createdsearch improvements on unprocessed folderpaired file list added and improved checks for already downloaded filesforce option added by default for SRAchange main classchange docker instancerefactor, query corrections and gradle updatepermission settings only if there was no permission to begin withquery limit slightly decreasedimprovements on filefindingimplementation bumps for new gradlecleanupsyncslightly changed amplicon pathlogger disabled for other org packages and merge service files added for rdf4jmetadata updatessequence info avu checkvalidation improvements and rdf files stored under investigationformatting new ontologysyncsra toolkit test addedignore updateignore updategzip compression movedsra toolkit functionality addedpermission corrections and code cleaningfix ngtax pathssh upload