Commits · master · UNLOCK / cwl

18 Jun, 2021 1 commit
- hdt compression and sapp microbes update · b96270af
  Jasper Koehorst authored Jun 18, 2021
  
  b96270af
17 Jun, 2021 1 commit
- cwl update · e1aaac46
  Jasper Koehorst authored Jun 17, 2021
  
  e1aaac46
16 Jun, 2021 2 commits
- Merge branch 'master' of https://git.wur.nl/unlock/cwl · 49c82bf2
  Jasper Koehorst authored Jun 16, 2021
  
  49c82bf2
- ena workflow and elements. · 0cec0635
  Jasper Koehorst authored Jun 16, 2021
  
  0cec0635
07 Jun, 2021 4 commits
- bbmap ref not optional · 09e04dcf
  Nijsse, Bart authored Jun 07, 2021
  
  09e04dcf
- docs and labels · 33049fcc
  Nijsse, Bart authored Jun 07, 2021
  
  33049fcc
- some inputs renaming · 99498b4c
  Nijsse, Bart authored Jun 07, 2021
  
  99498b4c
- input rename and output optional · 12a4a3d0
  Nijsse, Bart authored Jun 07, 2021
  
  12a4a3d0
04 Jun, 2021 3 commits
- Merge branch 'master' of https://git.wur.nl/unlock/cwl · 277ad766
  Koehorst, Jasper authored Jun 04, 2021
  
  277ad766
- sync ena and ngtax · 89fceac5
  Koehorst, Jasper authored Jun 04, 2021
  
  89fceac5
- docs and other · bfd7dba6
  Nijsse, Bart authored Jun 04, 2021
  
  bfd7dba6
03 Jun, 2021 1 commit
- corrected output · 28cbba0d
  Nijsse, Bart authored Jun 03, 2021
  
  28cbba0d
31 May, 2021 1 commit
- bin directory as output · 89e15d01
  Nijsse, Bart authored May 31, 2021
  
  89e15d01
28 May, 2021 9 commits
- GTDB-Tk bin taxon classification with optional · 2ee10184
  Nijsse, Bart authored May 28, 2021
  
  2ee10184
- prefix typop + footer · b2acbadb
  Nijsse, Bart authored May 28, 2021
  
  b2acbadb
- fix n footer · 8cc10d6e
  Nijsse, Bart authored May 28, 2021
  
  8cc10d6e
- namespace · 41f74cd3
  Nijsse, Bart authored May 28, 2021
  
  41f74cd3
- added unlock footer · b4ad0cf3
  Nijsse, Bart authored May 28, 2021
  
  b4ad0cf3
- added unlock footer · ccc943c3
  Nijsse, Bart authored May 28, 2021
  
  ccc943c3
- compress dir with tar · 83ef041f
  Nijsse, Bart authored May 28, 2021
  
  83ef041f
- --force · 49e131b7
  Nijsse, Bart authored May 28, 2021
  
  49e131b7
- tool for retrieving unbinned contigs · f1ee59eb
  Nijsse, Bart authored May 28, 2021
  
  f1ee59eb
27 May, 2021 2 commits
- gtdbtk classify workflow · 8750adbb
  Nijsse, Bart authored May 27, 2021
  
  8750adbb
- blank lines · 30d0f2d1
  Nijsse, Bart authored May 27, 2021
  
  30d0f2d1
26 May, 2021 1 commit
- added CheckM workflow · a3232baa
  Nijsse, Bart authored May 26, 2021
  
  a3232baa
24 May, 2021 2 commits
- CheckM cwl · 8ec00b6a
  Nijsse, Bart authored May 24, 2021
  
  8ec00b6a
- label fix · 2350cb4f
  Nijsse, Bart authored May 24, 2021
  
  2350cb4f
21 May, 2021 9 commits
- more spades compression · 48f3723b
  Nijsse, Bart authored May 21, 2021
  
  48f3723b
- Moved contamination filter to quality workflow · de63df25
  bart authored May 21, 2021
  
  de63df25
- Removed kraken2 step. Added spades output file compression · 854fa08a
  bart authored May 21, 2021
  
  854fa08a
- graphs should have been paths · 22458024
  bart authored May 21, 2021
  
  22458024
- .fastq.gz -> fq.gz · 6df0de42
  Nijsse, Bart authored May 21, 2021
  
  6df0de42
- small fixes · 2a6d619b
  bart authored May 21, 2021
  
  2a6d619b
- Styling update · 29e64128
  bart authored May 21, 2021
  
  29e64128
- Fixed to work with the new quality workflow · 0cb0d11f
  bart authored May 21, 2021
  
  0cb0d11f
- needs more updating · 49a9d277
  bart authored May 21, 2021
  
  49a9d277
20 May, 2021 1 commit
- output .fastq to .fq · 622223a6
  Nijsse, Bart authored May 20, 2021
  
  622223a6
19 May, 2021 2 commits
- cwl sync only · e251ff62
  Nijsse, Bart authored May 19, 2021
  
  e251ff62
- switched to contigs for binning · 2f379957
  Nijsse, Bart authored May 19, 2021
  
  2f379957
17 May, 2021 1 commit
- Moved Fastq merge in quality workflow when using multiple libraries · 8bc1717e
  Nijsse, Bart authored May 17, 2021
  
  8bc1717e