Commits · ae4e5739397e93b94ab504c7116e451d993b012a · rev_polyploids / PolyHaplotyper · GitLab

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Sep 27, 2017
- Large cleanup and revision of code, documentation and vignette. Main function... · ae4e5739
  unknown authored 8 years ago
  ae4e5739
Aug 11, 2017
- Improved function solveOneF1, cleaned up the code, extended vignette · fb302fb1
  Voorrips, Roeland authored 8 years ago
  
  fb302fb1
Aug 03, 2017
- Vignette and data added, some functions renamed · b4a0fb14
  Voorrips, Roeland authored 8 years ago
  
  b4a0fb14
Jul 25, 2017
- various bug fixes, new function haploblock_df2list · c9190a5a
  Voorrips, Roeland authored 8 years ago
  
  c9190a5a
Jun 13, 2017
- Added several diagnostics, overview and summary functions and some extra documentation · e8280069
  Voorrips, Roeland authored 8 years ago
  
  e8280069
Jun 02, 2017
- Added and tested pedigreeHapdosCheck and expandHapdos · 25b88a18
  Voorrips, Roeland authored 8 years ago
  
  25b88a18
May 26, 2017
- Improvements debugged. Results more trustworthy (though less appealing) than... · ce1d2e61
  Voorrips, Roeland authored 8 years ago
  ce1d2e61
May 23, 2017
- rewrote haplotypeDosagesF1 to use segregation rates (untested yet). Found that... · 6c815f3d
  Voorrips, Roeland authored 8 years ago
  6c815f3d
May 16, 2017
- Bug fixes; more output in haplotypeDosagesF1; works through Geert's 4- and 5-SNP data of March 2017 · b85fcef9
  Voorrips, Roeland authored 8 years ago
  
  b85fcef9
May 11, 2017
- Lots of bug fixes. Geert's original dat now run fine again. · 46157a0c
  Voorrips, Roeland authored 8 years ago
  
  46157a0c
Apr 24, 2017
- new function solveAllHaploblocks. Still checking first 4 of Geerts "old"... · 483f1b7d
  Voorrips, Roeland authored 8 years ago
  483f1b7d
Apr 21, 2017
- new untested haplotypeDosagesF1 for multiple F1s. Issues with ahc(complete)list in check package · 73160ccf
  Voorrips, Roeland authored 8 years ago
  
  73160ccf
Apr 10, 2017
- new completeAllHaploComb. Start with use of multiple F1 populations. · 5b4cabbc
  Voorrips, Roeland authored 8 years ago
  
  5b4cabbc
Mar 23, 2017
- many changes, esp. in allHaploComb and haplotypeDosagesF1; global variables ahcploidy and ahclist · 32c7b45b
  Voorrips, Roeland authored 8 years ago
  
  32c7b45b
Feb 27, 2017
- second minfrac value · 1226128d
  Voorrips, Roeland authored 8 years ago
  
  1226128d
Feb 21, 2017
- improvement of haplotypeDosagesF1. Replaced all (contig) alleles by haplotypes. · baabaffe
  Voorrips, Roeland authored 8 years ago
  
  baabaffe
Feb 15, 2017
- First commit; working version with documentation. · f51391b1
  Voorrips, Roeland authored 8 years ago
  
  f51391b1