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66da9665

Commit 66da9665 authored 3 years ago by Lannoy, Carlos de

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fixes for benchmarking and thresholding

parent 7cc65f8a

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Changes 9

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argparse_dicts.py 8 additions, 2 deletions

argparse_dicts.py
inference/compile_model.py 18 additions, 19 deletions

inference/compile_model.py
run_production_pipeline.py 3 additions, 1 deletion

run_production_pipeline.py
run_production_pipeline.sf 6 additions, 3 deletions

run_production_pipeline.sf
threshold_search/optimize_thresholds.py 26 additions, 4 deletions

threshold_search/optimize_thresholds.py
threshold_search/optimize_thresholds.sf 1 addition, 61 deletions

threshold_search/optimize_thresholds.sf
threshold_search/optimize_thresholds_analysis.sf 89 additions, 0 deletions

threshold_search/optimize_thresholds_analysis.sf
validation/quick_benchmark.py 59 additions, 27 deletions

validation/quick_benchmark.py
validation/quick_benchmark_16s.sf 90 additions, 0 deletions

validation/quick_benchmark_16s.sf

with 300 additions and 117 deletions

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