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Commit e132785e authored by Lensing, Kim's avatar Lensing, Kim
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Edit README.md

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......@@ -20,10 +20,10 @@ The pipeline starts by using `porechop` to trim the adaptors, then it uses `Flye
- [Minimap2](https://github.com/lh3/minimap2) - map long reads to reference. Genome alignment
- R - [pafCoordsDotPlotly](https://github.com/tpoorten/dotPlotly) - plot genome alignment, to compare the new assembly with another genome
*overview not up to date
| ![DAG](/workflow2.png) |
|:--:|
|*Pipeline workflow* |
<img src="/workflow2.png" alt="DAG" width="500"/>
#### Copy the pipeline:
Copy the pipeline to your directory, where you would run the pipeline.
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