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Repository for Python raster GIS library with low memory requirements

PanTools, WUR Bioinformatics

HPC Deployment toolbox used at WUR for Anunna

The KB Robotics application which combines all the different modules.

ACT project for the masters programme Geo-Information Science at Wageningen University & Research, conducted for the Dutch Ministry of Defence

Contains Instructions how to set up iRODS for sysadmins and training material for different user goups.

Postprocessing --

CNN methods that estimate the diameter of the crop, even when it's occluded.

Scripts and resources used for my MSc Thesis at the Bioinformatics chair group.

The goal this project is to create a pipeline that automates the secondary metabolite phylogenetic analysis of fungi to a certain extent.

A script for retrieval of SMILES chemical data of compounds produced by Biosynthetic Gene Clusters. Data is gathered from the MIBiG repository (single package with all entries in JSON format)

Calculate the diversity of your gene clusters! Using hmmscan to find the pfam domains. Jaccard, DDS, GK as distance metrics including sequence similarity as a modifier. It outputs tab delimited network files that can be visualized in Cytoscape.

BAIT - a tool for breakpoint analysis and inference of time series

video machinelearning using yolov3 on windows 10

This project is containing some code and data for the tutorial on 3D plant phenotyping at the Summerschool on Application of Machine Learning in Plant Sciences, 12–16 September 2022, Einsiedeln, Switzerland.

Multiple protein structure alignment and feature extraction suite