Biosynthetic Genes Similarity Clustering and Prospecting Engine.
Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard index, a modified Domain Duplicate Score and the Goodman-Kruskal gamma function)
Arabidopsis eQTL analysis platform
Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard Index of domain types, Domain Sequence Similarity the Adjacency Index)
The code for discovering novel gcGC's in publicly available genomes can be found here.
CatchCam is the software of the Catchcam hardware
This project aims to develop the methodological framework for Food System Seismology built upon datafication, data science, data economy
Development of an R Shiny application for polyploid QTL mapping based on packages such as polqtlR, MAPpoly and others.
R for microbial ecology tutorial code