Explore projects

Main aim is to provide tools for tracing flooding events in the Netherlands. The emphasis is on water damage caused by large amounts of rain.

Scripts to retrieve and distribute the latest BLAST databases from NCBI

Source-code for the training of the deep-learning algorithms (yolov5 and efficientnet)

Snakemake pipeline to do QC on short reads and k-mer based genome estimation for genome size, heterozygosity, ploidy and repeat content on both short reads and PacBio HiFi data.