Explore projects

Series of scripts developed part of the Rationally designed microbiomes project.

A pipeline for mapping loss-of-function mutations induced by EMS mutagenesis.

This repository is meant to show the R scripts that were written by Group 4 for the project of Spatial and Temporal Modelling at Wageningen University & Research. The input data for the scripts is not provided in this repository.

repository of code used for RNAseq analysis

OrV after heat-stress paper

Repository of code belonging to the wastewater fingerprinting paper: Fingerprinting toxic potencies in wastewater using gene expression profiling in C. elegans as a bioanalytical tool.

Analysis code repository for the minor thesis project at BIF group. Topic: Using machine learning to predict underlying factors for plant meiotic recombination rate variation Supervisor: Aalt-Jan van Dijk

Sample code for Shiny apps that need to show plot previews and download plots in high (printing quality) resolution.

eQTL analysis of four seed germination stages

R for microbial ecology tutorial code

First research question - PhD WJS

repository for code and some data for paper on codon bias in highly expressed genes