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An Interactive Visualization Tool for Comparison of Networks

The code used in the MSc thesis "Learning prokaryote promoter-protein grammar via deep learning".

scripts and data belonging to the Gpa2 transcriptome paper

R for microbial ecology tutorial code

repository of code used for RNAseq analysis

Development of an R Shiny application for polyploid QTL mapping based on packages such as polqtlR, MAPpoly and others.

4 temperature paper data & analysis

This repository is meant to show the R scripts that were written by Group 4 for the project of Spatial and Temporal Modelling at Wageningen University & Research. The input data for the scripts is not provided in this repository.

Shiny app showing the relationship between odds ratio and relative risk

Repository of code belonging to the wastewater fingerprinting paper: Fingerprinting toxic potencies in wastewater using gene expression profiling in C. elegans as a bioanalytical tool.

analysis belonging to manuscript

R and Big data course

Data and script to analyze OrV infection in males and hermaphrodites