Explore projects

repository of code used for RNAseq analysis

Development of an R Shiny application for polyploid QTL mapping based on packages such as polqtlR, MAPpoly and others.

4 temperature paper data & analysis

This repository is meant to show the R scripts that were written by Group 4 for the project of Spatial and Temporal Modelling at Wageningen University & Research. The input data for the scripts is not provided in this repository.

Shiny app showing the relationship between odds ratio and relative risk

Repository of code belonging to the wastewater fingerprinting paper: Fingerprinting toxic potencies in wastewater using gene expression profiling in C. elegans as a bioanalytical tool.

analysis belonging to manuscript

R and Big data course

Data and script to analyze OrV infection in males and hermaphrodites

Phyloseq application that transforms Study HDT files into input files for phyloseq.

This Gitlab project contains the scripts used for the generation of the ~5.000.000 unique barcode IDs, used for the construction of the ID tags. A description of the pipeline dataflow in PDF-format, as well as input- and output data, are included