Explore projects

The code for discovering novel gcGC's in publicly available genomes can be found here.

Pipeline to rank multiple putative BGC assemblies as those generated by biosyntheticSpades when there are multiple possible paths in the assembly graph. Code is derived by an early version of BiG-SCAPE [https://git.wur.nl/medema-group/BiG-SCAPE]

Decrypt AES-128 encrypted strings from an AWX pg_dump.

Reliable CNV detection in plant genomes

Scripts used in my Master thesis project on calling homopolymers in nanopore data using neural networks.

Volume of each building on the campus

using jupyter notebooks and nbgrader to partially automate exercise grading for the course geoengineering, and the design of a proposal for a final exam for the course geoengineering

CatchCam is the software of the Catchcam hardware