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This software builds upon BirdNet-Analyzer for further analysis of detected bird species and builds a dash board for visualizing species at varios temporal scales.

Advanced Bioinformatics Project RNAseq

An intermediate template repository for python projects

An advanced template repository for python projects

Source-code for the training of the deep-learning algorithms (yolov5 and efficientnet)

ACT project for the masters programme Geo-Information Science at Wageningen University & Research, conducted for the Dutch Ministry of Defence

PanTools, WUR Bioinformatics

ACT project for the masters programme Geo-Information Science at Wageningen University & Research, conducted for the Dutch Ministry of Defence

PanTools, WUR Bioinformatics

Snakemake pipeline to do QC on short reads and k-mer based genome estimation for genome size, heterozygosity, ploidy and repeat content on both short reads and PacBio HiFi data.