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Source-code for the training of the deep-learning algorithms (yolov5 and efficientnet)

Advanced bioinformatics groups assignment period 2 2019-2020

Time budget calculation based on cow location

New version after OneDrive corrupted the Git files

Scripts used in my Master thesis project on calling homopolymers in nanopore data using neural networks.

NCBI taxonomy dump parser

This is an adaptation of CloudSPAdes which uses taxonomical annotation of reads additionally to linked reads.

Data and code for the summerschool Image Processing for Plant Phenotyping

This project is containing some code and data for the tutorial on 3D plant phenotyping at the Summerschool on Application of Machine Learning in Plant Sciences, 12–16 September 2022, Einsiedeln, Switzerland.