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PanTools, WUR Bioinformatics

HPC Deployment toolbox used at WUR for Anunna

TrakCoreLib is a Python library that provide core modules for image processing, camera model and calibration, 2d and 3d tracking, etc..

FLiTrak3D (or FLIT for “FLight Insect Tracker”) is a Python package that prepare video recordings to be used by DeepLabCut (simple 2D/3D tracking, cropping and stitching). Then use DeepLabCut to estimate the 2D coordinates of various bodyparts of a flying insect and fit a 3D skeleton to these 2D coordinates

Het MNP model zelf.

NEmatology DNA Variant Analysis and Calling pipeline = NEDVAC

nemmap is a single-command pipeline to process bacterial (full 16S) or fungal (full ITS) reads obtained by Nanopore sequencing. This pipeline is developed and intended for internal use by the Laboratory of Nematology (WUR).

An automated pipeline to generate CADD scores.