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MGnify UHGG from EBI integration with SAPP conversion

SRA XML crawler for datasets

MATLAB-based application used to analyze the structural identifiability of ODE based models

Repository for the transcriptomic peppers project in Advanced Bioinformatics 2025

Reinforcement Learning agent that uses sarsa q learning algorithm to learn how to optimize greenhouse management.

flow accumulation model made in R (and partly still in bash).

generic python modules and utilities

My take on how I would design the RNA-seq pipeline and differential gene expression analysis.

Data and analysis for CB4856 Introgression line project