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CIHEAM course material

using jupyter notebooks and nbgrader to partially automate exercise grading for the course geoengineering, and the design of a proposal for a final exam for the course geoengineering

RSnode from CommonSense project

The code for discovering novel gcGC's in publicly available genomes can be found here.

First research question - PhD WJS

Biosynthetic Genes Similarity Clustering and Prospecting Engine.

Defines a distance metric between Gene Clusters using a combination of three indices (Jaccard Index of domain types, Domain Sequence Similarity the Adjacency Index)

A Species Sensitivity Distribution for temperature induced mortality: operational online