Explore projects

FLiTrak3D (or FLIT for “FLight Insect Tracker”) is a Python package that prepare video recordings to be used by DeepLabCut (simple 2D/3D tracking, cropping and stitching). Then use DeepLabCut to estimate the 2D coordinates of various bodyparts of a flying insect and fit a 3D skeleton to these 2D coordinates

This is a release of the SURFsara package of utilities that we use to boot our nodes with PXE-enabled network cards. This was developed because we always want to use the PXE-enabled network card as our first boot device.

CIHEAM course material

Pipeline to rank multiple putative BGC assemblies as those generated by biosyntheticSpades when there are multiple possible paths in the assembly graph. Code is derived by an early version of BiG-SCAPE [https://git.wur.nl/medema-group/BiG-SCAPE]

Happy - Haplotype assembly using Next-generation Sequencing (NGS) reads.