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Commit d0c69df5 authored by Derks, Martijn's avatar Derks, Martijn
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update

parent aa5c3b87
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......@@ -497,6 +497,7 @@ the alternative amino acid (alternative allele):
` 21,G,D`
Output looks like this:
` 235,G,E 0.076 `\
` 5,V,A 0.287 `\
` 22,C,Y -8.028 `\
......@@ -529,7 +530,7 @@ What we need for the Provean analysis is 1) the protein sequence of the
gene (or rather, the transcript), and 2) a file with the variation in
the same format as listed above.
All our commercial pigs have a missense variant (Pro192Leu) in this gene. We can use provean to infer the impact of this variant.
All our sequenced Large White pigs have a missense variant (Pro192Leu) in this gene. We can use provean to infer the impact of this variant.
Two files are available to run the analysis:
......
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