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Dankers, Rutger
LPJmL_tools
Commits
7ef149a0
Commit
7ef149a0
authored
5 years ago
by
Dankers, Rutger
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adding job submission script for default configuration model run
parent
2919da2a
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.gitignore
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.gitignore
conf/default_cru/run_lpjml.conf
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conf/default_cru/run_lpjml.conf
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7ef149a0
# ignore default R files
.RData
.Rhistory
# ignore job log files
output_*.txt
error_output_*.txt
# other files not suitable for version control
*.pdf
*.doc
*.docx
\ No newline at end of file
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conf/default_cru/run_lpjml.conf
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7ef149a0
#!/bin/bash
#-----------------------------Mail address-----------------------------
#SBATCH --mail-user=rutger.dankers@wur.nl
#SBATCH --mail-type=ALL
#-----------------------------Output files-----------------------------
#SBATCH --output=output_%j.txt
#SBATCH --error=error_output_%j.txt
#-----------------------------Other information------------------------
#SBATCH --comment=3720021400
#SBATCH --job-name=lpjml.conf
#-----------------------------Required resources-----------------------
#SBATCH --qos=std
#SBATCH --time=60
#SBATCH --ntasks=16
#SBATCH --cpus-per-task=1
#SBATCH --mem-per-cpu=64000
#-----------------------------Environment, Operations and Job steps----
#load modules
module
load
slurm
mpich
/
gcc
/
64
/
3
.
1
.
3
module
load
netcdf
/
gcc
/
64
/
4
.
3
.
3
module
load
udunits
/
gcc
/
64
/
2
.
2
.
25
export
LPJROOT
=
"/home/WUR/danke010/LPJml_v4.0.002/LPJmL"
mpirun
$
LPJROOT
/
bin
/
lpjml
/
home
/
WUR
/
danke010
/
mycode
/
lpjml_tools
/
conf
/
default_cru
/
lpjml
.
conf
# sbatch /home/WUR/danke010/mycode/lpjml_tools/conf/default_cru/run_lpjml.conf
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