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Created with Raphaël 2.2.017Dec161510614Nov30Oct119Sep1895229Aug1594Jul111Jun27May1613109830Apr29181728Mar212027Feb22211814131211754131Jan30292825232221151018Dec17141210764329Nov23212013129878Jun17Mar23Feb2159Dec11May29Apr1215Mar718Feb1714Jan17Nov21Oct25Sep2423218431Aug2420191815141328Jul222095125Jun24527May262221201915Apr10Mar26Feb22Jan713Oct25Jul1416May4Apr2Mar126Feb1931Jan30292819Dec16Oct27Aug2322212029Jul171615121030Jun282726252420171311107620May1387215Apr98428Mar2625211927Feb12129Nov201531Oct3029252126Sep4331Aug302823106231Jul27262524232013121020Jun121131May29252421181716151411926Apr25242321191812230Mar2216152Feb27Jan261110Merge branch 'master' of https://git.wur.nl/ctdas/CTDAS into feature-STILTMerge branch 'master' into 'master'The templates for jobs and rc-files used by start_ctdas.sh are now in a separate templates folder. This allows each user to modify their templates for running if needed, and to add templates for their own purpose.Merge branch 'master' into 'master'remove redundant print messagesMerge branch 'master' of https://git.wur.nl/ctdas/CTDASMerge branch 'master' into 'master'I think we do not need this print statement :)Auke tests making change to master through fork as wellMerge branch 'master' into 'master'Ingrid tests making a change to master through forkUpdate to stilt.r, please be more specificMerge branch 'update_license' into 'master'Added project name, removed old license fileAdd LICENSEMerge branch 'improve_bash_help' into 'master'Merge branch 'master' into 'improve_bash_help'The help function of the bash scripts was somewhat clunky, and has now been updated to give more verbose information on how to use them. This concerns:Merge branch 'add_user_name_to_log_file' into 'master'username now printed firstread statevector uncertainties from fileliesbethliesbethread statevector uncertainties from filefile outdated, no longer neededtrunktrunkvorige update was nog niet optimaal...update to make sure flux output is also written if no observations in window (no update statevector)small changes to facilitate use with focal retrievalremoved reading of all flask obs in advance step + added a zonal mdm scaling based on number of observations for column obsadded additional file for modified analysis pipelineadded respiration parameterization v1 + modified analysis pipeline and functions to write output in standard formatadded option for latitude-dependent mdm scaling for column observationsfix consistency units of samplesadded date to optimizer.nc filecorrected obpack_num nameupdate to included latitude and longitude in diagnostics outputfile optimizer.ncno bias correction, not neededctdas-cosmoctdas-cosmono bias correction - whole Hx gets updated and bias removes to many datano cdo afternoon meanrelative weight for flask and xco2 obs, and added advance parameter to add_observations to make sure all flask obs are read in advance stepWorks, added filesWorking, 22 stations, different mdms
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