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Created with Raphaël 2.2.013Aug121129Jul282723191312225Jun2116131110976543219May1713Apr22Feb18177Dec29Oct24Sep1521Aug2019131121Jul2017148324Jun28May14131264Mar326Feb242117Jan16141323Dec191817161510614Nov30Oct119Sep1895229Aug1594Jul111Jun27May1613109830Apr29181728Mar212027Feb22211814131211754131Jan30292825232221151018Dec17141210764329Nov23212013129878Jun17Mar23Feb2159Dec11May29Apr1215Mar718Feb1714Jan17Nov21Oct25Sep2423218431Aug2420191815141328Jul222095125Jun24527May262221201915Apr10Mar26Feb22Jan713Oct25Jul1416May4Apr2Mar126Feb1931Jan30292819Dec16Oct27Aug2322212029Jul171615121030Jun282726252420171311107620May1387215Apr98428Mar2625211927Feb12129Nov201531Oct3029252126Sep4331Aug302823106231Jul2726Fixed issue where missing values could not be multiplied by CDOMerge all files at end of cycleSwitched to sparse matrix in statevector_icon to handle large statevectorsDownload GPCP data if not presentWriting the meteorology file for FF and ocean to the tmpdirFix error where some CDO versions do not have <setattribute>Cleanup, .gitignore now workingQoL changesAdded requirements file for easy portingRenamed to use Git sib-automated directory; renamed to not use builtins as namesRead info for MERRA processing from namelistsRead info for MERRA processing from namelistsRemove warnings for missing key, value pairs in .rc fileImprove SiB workflow, including upscalingSiB automated, upscaling addedDownload, link and process MERRABugfixes and QoLFixed conflictsAdded jobfileSuppress posts on importImproved documentationRemoved commented codeFinalise dacycle in pipelineMaking SiB run with existing scripts. To be optimised.Enabling background optimization and further implementationsMerge branch 'master' into ctdas-iconFixed 2 small errors, connected to the preprocess observations pipeline and the ocean optimization key (follow up from previous update).Added preprocessing observations pipeline, which reads the obspack files and writes them as pickle files. Small fix in obs_gvp_co2.py for encoding on special characters in dataset_summary. Small bug fix in observationoperator_tm5_cteco2.py in logging message. Small string conversion bug fix in initexit_cteco2 for keeping opts from initial job. Added module load NCO for platform file Aether. Fix for statevectorNHgridded_cteco2.py for optimizing ocean fluxes, which per default should be true, but was now false in case the ocn.optimize key was not present.Merge branch 'remco' into 'master'Change all instance of .flat to .flatten(), which caused a problem in forward runs.Tested upscaling the biosphere; works nowSmall changes to the emission modelMake emissionmodel conform new climatology for the ocean fluxesAdded scaling factor for ocean fluxes based on meteorologyAdded possibility to NOT create emissions for power generation; made meteo time profiles compatible with downloadedImprove gitignoreImproved readabilityFixed typo in getting fuel demand from carsQoL changes + removed cache filesImprove sequentially preprocessing different cycles