394333af · refactor sam-similarity.pl

29cfaf59 · refactor sam-similarity.pl

0c10b8d5 · Merge branch 'dev' into main

da5da828 · conda env yaml

4ddc55ac · update ignore

28b23773 · Add gitignore

771e2260 · Delete Makefile

af785f0e · Merge branch 'main' of git.wur.nl:brank001/sam-harmonization into main

00895b5a · Add LICENSE

cf7f9a21 · bug fixed to allow AS:i:0 as valid score

713c7747 · bug fix for secondary alignemnts of reversed hits

bfe26916 · Update .gitlab-ci.yml file

de155d15 · Dockerfile

67f55e4e · add +x

45b9f2d8 · Merge branch 'main' of git.wur.nl:brank001/sam-harmonization into main

8104363a · Typo

e93d9451 · Typos