Fix add_functions in panproteome
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All threads resolved!
We discovered that in a panproteome, add_functions
doesn't always work. What happens in some cases is that it basically throws back all protein names with the message that it could not find them, whereas closer inspection of the database indicates they do exist. This might be related to the fact that sometimes |
and :
symbols in fasta headers are replaced by _
in pantools; trying to fix this here.
Merge request reports
Activity
assigned to @worku005
requested review from @arjan.draisma
added 8 commits
-
bb7eb251...9c8d13f1 - 7 commits from branch
develop
- 50f10e93 - Merge branch 'develop' into fix_add_functions_panproteome
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bb7eb251...9c8d13f1 - 7 commits from branch
- Resolved by Draisma, Arjan
added 1 commit
- 231587f9 - simplify regex for fixing protein names in functional analysis
mentioned in commit 664f0c05
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