Skip to content
GitLab
Projects Groups Snippets
  • /
  • Help
    • Help
    • Support
    • Community forum
    • Submit feedback
    • Contribute to GitLab
  • Sign in
  • P PanTools
  • Project information
    • Project information
    • Activity
    • Labels
    • Members
  • Repository
    • Repository
    • Files
    • Commits
    • Branches
    • Tags
    • Contributors
    • Graph
    • Compare
  • Issues 32
    • Issues 32
    • List
    • Boards
    • Service Desk
    • Milestones
  • Merge requests 2
    • Merge requests 2
  • CI/CD
    • CI/CD
    • Pipelines
    • Jobs
    • Schedules
  • Deployments
    • Deployments
    • Environments
    • Releases
  • Packages and registries
    • Packages and registries
    • Container Registry
  • Monitor
    • Monitor
    • Incidents
  • Analytics
    • Analytics
    • Value stream
    • CI/CD
    • Repository
  • Wiki
    • Wiki
  • Snippets
    • Snippets
  • Activity
  • Graph
  • Create a new issue
  • Jobs
  • Commits
  • Issue Boards
Collapse sidebar
  • bioinformatics
  • PanTools
  • Repository
  • Branches
  • Overview
  • Active
  • Stale
  • All
  • pantools_v1 protected
    279b8995 · Updated README · Oct 11, 2019
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • pantools_v2 merged protected
    2bd17f67 · Added LICENSE · Oct 12, 2019
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • pantools_v3.2 protected
    067c8993 · Merge branch 'master' into pantools_v3.2 · Dec 21, 2021
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • optimized-build-pangenome
    fa46e477 · Add mapping validation to end-to-end test. · Apr 19, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • optimized-map
    72bbc6ac · Tiny documentation fix. · May 10, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • java-11
    eae67b68 · Limit git clone depth to 1 to reduce git clone time. · Jun 16, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • refactor-check-if-nucleotide-sequence
    2936e36d · Refactor pre-flight FASTA checks method into separate methods. · Jun 24, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • remove-url-validation
    944f2f48 · Remove URL validation with com.* package, replace with URI creation. · Aug 24, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • remove_skiparrays
    1b7502e1 · next bit of removing create_skip_arrays.java (NB: does not compile) · Sep 19, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • add-scoring-matrices-to-resources
    34a90915 · Added missing conversion to Globals for --blosum · Sep 22, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • fasta-validation merged
    ca6713fe · Merge branch 'add-custom-jakarta-constraint-tests' into 'master' · Sep 23, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • add_RG_option
    50847454 · added comments · Oct 05, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • fix-indexing-error-add_annotations
    d6849a35 · Made getMrnaSequence return an empty string as soon as an exception wat... · Oct 21, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar
  • docker
    058b2ca2 · Remove ASTER compilation from Dockerfile, already provided with conda. · Nov 03, 2022
    Compare
    Download source code
    zip tar.gz tar.bz2 tar