Merge branch 'ipresto_refactor' into 'master'

.gitignore

.gitlab-ci.yml

README.md

auxiliary_scripts/run_multiple_lda.py

files/biosynthetic_domains.txt

files/domains_colour_file.tsv

ipresto.py

ipresto/__init__.py

ipresto/__version__.py

ipresto/auxiliary_scripts/__init__.py

ipresto/auxiliary_scripts/add_tc_score.py

ipresto/auxiliary_scripts/alter_pfamsjs.py

ipresto/auxiliary_scripts/check_domstats_overlap.py

ipresto/auxiliary_scripts/convert2json.py

ipresto/auxiliary_scripts/extr_domhits_from_domtab.py

ipresto/auxiliary_scripts/fetch_ncbi_genomes_mgb.py

ipresto/auxiliary_scripts/get_antismash_classes.py

ipresto/auxiliary_scripts/get_classes.py

ipresto/auxiliary_scripts/link_mods_bgcs.py

ipresto/auxiliary_scripts/link_subcluster_ids.py