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bioinformatics
hecaton
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5d895c4be4b81058c2ef6f080060741223b17afe
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8
v.0.5.1
v0.5.0
v0.4.0
v0.3.0
v0.2.2
v0.2.1
v0.2.0
v0.1.0
9 results
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Created with Raphaël 2.2.0
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Added new location of Hecaton repository to README
master
master
Added output section to README
Updated Docker tag
Fixed tests
v.0.5.1
v.0.5.1
Updated Docker tag
v0.5.0
v0.5.0
Added potentially missing dependency of hexdump
Updated vcf_to_table.py and merge_vcf_files.py. Added nextflow script to add read depth information to calls
Added option to merge VCFs containing multiple samples per file
Updated Dockerfile and requirements.yml files
v0.4.0
v0.4.0
Updated Dockerfile and requirements.yml files
Fixed tests
Fixed tests
Changed permissions of nextflow binary in Docker image
Added more options to vcf_to_table.py
FILTER field is now correctly processed in vcf_to_table.py
Added option to merge VCF files without genotyping using read depth and to compute number of deletions supported by a change in read depth compared to flanking regions
Changed hash in Dockerfile
v0.3.0
v0.3.0
Updated Docker image version number
Fixed typo in documentation
Updated version numbers of Hecaton nextflow scripts
Added filtering script and fixed bugs
Corrected link in documentation to old repository
Added option to pull image from Docker Hub
Fixed some docker issues with hecaton_no_align
v0.2.2
v0.2.2
Fixed and tested hecaton_no_align.nf
Corrected small typo in readme
Corrected minor typo in changelog
v0.2.1
v0.2.1
Corrected changelog
Updated changelog
Added installation script and fixed bug with setting conda environments
Updated README
v0.2.0
v0.2.0
Added missing parameter to functional script
Added merging script and Slurm config file
Added the option to exclude certain chromosomes
Added nextflow script which can run Hecaton using pregenerated BWA mem alignments
Updated links in CHANGELOG.md
v0.1.0
v0.1.0
Corrected links in CHANGELOG.md
Initial release of Hecaton
Initial commit
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