Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
D
Docker Tripal
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Package Registry
Container Registry
Model registry
Operate
Environments
Terraform modules
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
applied-bioinformatics
Docker Tripal
Commits
6e59b620
Commit
6e59b620
authored
9 years ago
by
Eric Rasche
Browse files
Options
Downloads
Patches
Plain Diff
Adjust readme to reflect improved chado container
parent
23531520
No related branches found
Branches containing commit
Tags
v1.0
Tags containing commit
No related merge requests found
Changes
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
README.md
+5
-12
5 additions, 12 deletions
README.md
with
5 additions
and
12 deletions
README.md
+
5
−
12
View file @
6e59b620
...
...
@@ -29,23 +29,16 @@ tripal:
-
"
3000:80"
db
:
image
:
postgres:9.4
image
:
erasche/chado:latest
environment
:
-
POSTGRES_PASSWORD=password
# The default chado image would try to install the schema on first run,
# we just want the GMOD tools to be available.
-
INSTALL_CHADO_SCHEMA=0
volumes
:
-
/var/lib/postgresql/
data
-
/var/lib/postgresql/
9.4/
```
## Notes
It should be linked to a postgres container, instead of my chado
container. This is for a couple of reasons, namely my container won't
behave properly if you mount a volume and that's bad. Additionally, chado
is installed into the public schema in those containers (I mean, that
makes sense, right?), however Tripal expects Chado in a
`chado`
schema. My
[
chado schema builder
](
https://github.com/erasche/docker-recipes/blob/master/compile-chado-schema/chado/default/build.yml#L56
)
now accounts for that and generates multiple images.
## Contributing
Please submit all issues and pull requests to the
[
erasche/docker-tripal
](
http://github.com/erasche/docker-tripal
)
repository!
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment