Added config steps to readme

README.md

 # NPEC PHIS installation, documentation and development files
 
-For more information, please contact Jennifer de Rue or Sven Warris.
+For more information, please contact Jennifer de Rue or Sven Warris.
\ No newline at end of file
+
+## Installing services
+ 
+To install and run PHIS, execute these commands:
+
+```{bash}
+git clone https://git.wur.nl/NPEC/phis.git
+cd phis/docker
+docker-compose up -d
+```
+
+This will create 4 volumes to store database data and web server configurations. It will launch images for the tomcat web service, apache php web application, mongodb and postgresql. Adminer is installed to access the postgresql database. Docker networks 'frontend' and 'backend' are also activated. 
+
+To access the API, please add 'tomcat' as alias to localhost.
+
+## Installing PHIS configuration, web service and application
+
+Run docker build:
+
+```{bash}
+docker build --network=docker_frontend --network=docker_backend -t phis:latest .
+```
+
+Now enter interactive shell:
+
+```{bash}
+docker run --network=docker_frontend --network=docker_backend \ 
+	--volume docker_web_data:/var/www/html \ 
+	--volume docker_tomcat_conf:/tomcat/conf \ 
+	--volume docker_tomcat_webapps:/tomcat/webapps \ 
+	-i -t phis:latest  /bin/bash
+```
+
+From this shell runs these commands:
+
+```{bash}
+cd phis-webapp
+composer update
+sed -i 's/localhost:8084\/phis-ws\/rest/tomcat:8080\/phis2ws\/rest/g' config/*.php
+sed -i 's/localhost:8084\/phis2ws/tomcat:8080\/phis2ws/g' config/*.php
+sed -i 's/localhost/php/g' config/*.php
+cd ..
+sudo cp -r phis-webapp /var/www/html
+sudo chown -R www-data:www-data /var/www/html 
+
+sudo cp /home/phis/phis-ws/phis2-ws/target/phis2ws-v0.1.war /tomcat/webapps/phis2ws.war
+sudo cp /home/phis/tomcat/webapps/*war /tomcat/webapps/
+sudo cp /home/phis/tomcat/conf/tomcat-users.xml /tomcat/conf/
+sudo cp /home/phis/tomcat/webapps/manager/META-INF/context.xml /tomcat/webapps/manager/META-INF/
+```
+
+Please provide tokens and password (*phis*) when requested.
+
+Restart services outside container:
+
+```{bash}
+docker-compose restart php tomcat
+```
+
+In PHIS interactive shell, add repository:
+
+```{bash}
+cat rdf4j.sh | eclipse-rdf4j-2.4.1/bin/console.sh
+```
+
+Now these services are available:
+
+- http://tomcat:8080/phis2ws
+- http://localhost/phis-webapp/