Merge requests · bioinformatics / PanTools · GitLab

Bugfix msa mode

!70 · created Sep 13, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Sep 13, 2022
Bug fix classification group_info error when not using `--node`

!69 · created Sep 13, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Sep 13, 2022
Additional annotation check whether the sequence ID exists in a given genome

!67 · created Sep 08, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Sep 09, 2022
Fix add_antismash, go_enrichment and Fisher exact p-value calculation

!66 · created Sep 08, 2022 by Jonkheer, Eef master
- Merged
- 10
- Approved
updated Sep 09, 2022
Fixing checking invalid gff files where a feature is its own parent

!65 · created Sep 05, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Sep 05, 2022
Added Junit5 unit tests for functions in ProteomeLayer.java

!62 · created Aug 22, 2022 by Robin van Esch master
- Merged
- 2
- Approved
updated Aug 30, 2022
Added Picocli argument parsing and beans validation in cli package. 4 of 4 checklist items completed

!43 · created Jun 14, 2022 by Robin van Esch master
- Merged
- 140
- 1
- Approved
updated Aug 18, 2022
Resolved issue in kmer distance tables when skipping genomes

!61 · created Aug 10, 2022 by Jonkheer, Eef master
- Merged
- 1
- Approved
updated Aug 11, 2022
COG function_overview fix

!59 · created Aug 09, 2022 by Jonkheer, Eef master
updated Aug 10, 2022
Remove phenotype function

!58 · created Jul 25, 2022 by Jonkheer, Eef master
- Merged
- 14
- Approved
updated Jul 27, 2022
Improved file type recognition for add_functions

!55 · created Jul 21, 2022 by Jonkheer, Eef master
- Merged
- 2
- Approved
updated Jul 22, 2022
Update README.md

!57 · created Jul 21, 2022 by Jonkheer, Eef master
updated Jul 21, 2022
include readthedocs in readme and changelog and change default intellij...

!56 · created Jul 21, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Jul 21, 2022
Added read the docs documentation 1 of 2 checklist items completed

!50 · created Jul 05, 2022 by Robin van Esch master
- Merged
- 1
- Approved
updated Jul 21, 2022
Bugfix absent phase information in annotation file

!53 · created Jul 15, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Jul 20, 2022
Fix astral pro

!54 · created Jul 20, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Jul 20, 2022
Added script to download, check, and unpack interpro dataset.

!48 · created Jul 01, 2022 by Lankveld, Thijs van pantools_v3.1
- Merged
- 2
- Approved
updated Jul 20, 2022
Added script to download, check, and unpack interpro dataset.

!47 · created Jul 01, 2022 by Lankveld, Thijs van pantools_v3
- Merged
- 13
- Approved
updated Jul 20, 2022
update changelog with recent changes

!52 · created Jul 14, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Jul 14, 2022
Add function subselection

!51 · created Jul 08, 2022 by Jonkheer, Eef master
- Merged
- 5
- Approved
updated Jul 14, 2022

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