Merge requests · bioinformatics / PanTools · GitLab

Added support and configuration options for log4j2 logging

!85 · created Oct 31, 2022 by Robin van Esch master
- Merged
- 8
- Approved
updated Jan 18, 2023
Pantools v3.4 to release

!84 · created Oct 21, 2022 by Lankveld, Thijs van release
- Merged
updated Oct 21, 2022
Pantools v3.2 to release

!83 · created Oct 21, 2022 by Lankveld, Thijs van release
- Merged
updated Oct 21, 2022
Pantools v3.1 to release

!82 · created Oct 21, 2022 by Lankveld, Thijs van release
- Merged
updated Oct 21, 2022
Draft: Pantools v3.1 into release

!81 · created Oct 21, 2022 by Lankveld, Thijs van master
- Closed
updated Oct 21, 2022
include copyright info and better tab-autocompletion help to read-the-docs

!80 · created Oct 21, 2022 by Robin van Esch master
- Merged
- Approved
updated Oct 31, 2022
Handle co-features in annotation files for add_annotations

!79 · created Oct 19, 2022 by Workum, Dirk-Jan van master
- Merged
- 32
- Approved
updated Nov 10, 2022
Resolved issue where 'go_enrichment' crashed if antiSMASH output was added to pangenome

!78 · created Oct 18, 2022 by Jonkheer, Eef master
- Merged
- Approved
updated Oct 18, 2022
Update to conda environments 4 of 4 checklist items completed

!77 · created Oct 10, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Jan 13, 2023
Add read group CLI option in map

!76 · created Oct 05, 2022 by Ahmed, Nauman develop
enhancement
- Closed
- 4
updated Dec 13, 2022
Update CHANGELOG.md to have "Unreleased"

!75 · created Sep 22, 2022 by Workum, Dirk-Jan van master
updated Sep 22, 2022
Added Junit5 unit tests for custom bean validation constraints

!74 · created Sep 15, 2022 by Robin van Esch master
- Merged
- 4
updated Sep 23, 2022
Removed artificial runtime increase

!73 · created Sep 15, 2022 by Robin van Esch master
- Merged
- Approved
updated Sep 15, 2022
rename LOG to tmp.log in database directory

!72 · created Sep 13, 2022 by Workum, Dirk-Jan van master
- Merged
- 1
- Approved
updated Sep 13, 2022
Resolved issue where temporary unit test files for neo4j weren't removed on exit

!71 · created Sep 13, 2022 by Robin van Esch master
- Merged
- Approved
updated Sep 13, 2022
Bugfix msa mode

!70 · created Sep 13, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Sep 13, 2022
Bug fix classification group_info error when not using `--node`

!69 · created Sep 13, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Sep 13, 2022
Hotfix for command line validation and usage logging

!68 · created Sep 12, 2022 by Robin van Esch master
- Merged
- 2
- Approved
updated Sep 13, 2022
Additional annotation check whether the sequence ID exists in a given genome

!67 · created Sep 08, 2022 by Workum, Dirk-Jan van master
- Merged
- Approved
updated Sep 09, 2022
Fix add_antismash, go_enrichment and Fisher exact p-value calculation

!66 · created Sep 08, 2022 by Jonkheer, Eef master
- Merged
- 10
- Approved
updated Sep 09, 2022

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