Merge requests · bioinformatics / PanTools

Draft: Create full pangenome JSON for GeneSet Explorer

!237 · created Jun 28, 2024 by Workum, Dirk-Jan van add_gfa_export
- Closed
- 1
updated Aug 12, 2024
Fixed inconsistency in homology grouping 2 of 5 checklist items completed

!222 · created Jan 02, 2024 by Workum, Dirk-Jan van develop
- Closed
- 4
updated Jan 23, 2024
grouping_overview now sorts mrna ids alphabetically.

!177 · created Jul 06, 2023 by Robin van Esch develop
- Closed
- 1
updated Jul 07, 2023
Fix automatic skipping of genomes in core phylogeny

!139 · created Mar 09, 2023 by Jonkheer, Eef develop
- Closed
updated Mar 11, 2023
Moving busco_protein out of classification

!137 · created Mar 02, 2023 by Jonkheer, Eef develop
- Closed
- 25
updated Mar 11, 2023
Draft: Bugfixes and final changes for 4.0.0 release

!105 · created Dec 21, 2022 by Robin van Esch develop
- Closed
updated Dec 21, 2022
Add read group CLI option in map

!76 · created Oct 05, 2022 by Ahmed, Nauman develop
enhancement
- Closed
- 4
updated Dec 13, 2022
Draft: merge 'pantools_v3.5' into 'release'

!91 · created Nov 09, 2022 by Robin van Esch release
- Closed
updated Nov 18, 2022
Merge pantools v3.5 into master

!97 · created Nov 16, 2022 by Workum, Dirk-Jan van master
- Closed
updated Nov 18, 2022
Draft: Pantools v3.1 into release

!81 · created Oct 21, 2022 by Lankveld, Thijs van master
- Closed
updated Oct 21, 2022
Hotfix for cli validation package

!64 · created Sep 02, 2022 by Robin van Esch master
- Closed
updated Sep 08, 2022
Remove URL validation with com.* package, replace with URI creation.

!63 · created Aug 24, 2022 by Moed, Matthijs master
- Closed
- 1
updated Aug 25, 2022
Pantools update in v3

!3 · created Mar 31, 2021 by Smit, Sandra pantools_v3
- Closed
updated Mar 31, 2021