Commits · master · UNLOCK / scripts

15 Oct, 2021 4 commits
- move · fc18382b
  Nijsse, Bart authored Oct 15, 2021
  
  fc18382b
- move · 7d7af0fd
  Nijsse, Bart authored Oct 15, 2021
  
  7d7af0fd
- rsync thing · e19e1cb9
  Nijsse, Bart authored Oct 15, 2021
  
  e19e1cb9
- general statistics about read mapping of bins and the assembly · eb7ced6e
  Nijsse, Bart authored Oct 15, 2021
  
  eb7ced6e
13 Oct, 2021 2 commits
- shebang · db081f1f
  Nijsse, Bart authored Oct 13, 2021
  
  db081f1f
- bin assembly stats script · c16434f0
  Nijsse, Bart authored Oct 13, 2021
  
  c16434f0
28 Sep, 2021 1 commit
- duplication issue due to multiple ttl files · 9f055c2d
  Jasper Koehorst authored Sep 28, 2021
  
  9f055c2d
23 Sep, 2021 1 commit
- biom scripts · a32194bf
  Jasper Koehorst authored Sep 23, 2021
  
  a32194bf
21 Sep, 2021 3 commits
- clean up · abbcda63
  Jasper Koehorst authored Sep 21, 2021
  
  abbcda63
- pathway info · a09ed032
  Jasper Koehorst authored Sep 21, 2021
  
  a09ed032
- biom creation for picrust data · 59b50172
  Jasper Koehorst authored Sep 21, 2021
  
  59b50172
20 Sep, 2021 2 commits
- picrust export module · 27198b8f
  Jasper Koehorst authored Sep 20, 2021
  
  27198b8f
- taxonomy split fix · 4c7e0611
  Jasper Koehorst authored Sep 20, 2021
  
  4c7e0611
17 Sep, 2021 3 commits
- fixed label issue of sample and assay metadata fields · 16167999
  Jasper Koehorst authored Sep 17, 2021
  
  16167999
- Merge branch 'master' of https://git.wageningenur.nl/unlock/scripts · 317b710c
  Jasper Koehorst authored Sep 17, 2021
  
  317b710c
- add all keys to each sample and sort the biom file to ensure that metadata is ordered · 15f60d2d
  Jasper Koehorst authored Sep 17, 2021
  
  15f60d2d
09 Sep, 2021 1 commit
- exclude .git for rsync. Infrastructure only sync · bdda1ce0
  Nijsse, Bart authored Sep 09, 2021
  
  bdda1ce0
08 Sep, 2021 1 commit
- fastq to fasta format · c41d8e48
  Nijsse, Bart authored Sep 08, 2021
  
  c41d8e48
30 Aug, 2021 5 commits
- append needed for metadata · 5f573599
  Jasper Koehorst authored Aug 30, 2021
  
  5f573599
- destination and upload section removed · 83b3dc19
  Jasper Koehorst authored Aug 30, 2021
  
  83b3dc19
- upload function disabled as it is handled by the job execution · 78ec64c1
  Jasper Koehorst authored Aug 30, 2021
  
  78ec64c1
- ngtax scripts update · e10d825a
  Jasper Koehorst authored Aug 30, 2021
  
  e10d825a
- biom file creation script · 4bfd7b78
  Jasper Koehorst authored Aug 30, 2021
  
  4bfd7b78
27 Aug, 2021 1 commit
- NGTax to tsv files script extension for phyloseq / biom · 607664d6
  Jasper Koehorst authored Aug 27, 2021
  
  607664d6
23 Jul, 2021 1 commit
- extract from NGTax turtle file ASV fasta and counts in tsv · b54d4fcc
  Nijsse, Bart authored Jul 23, 2021
  
  b54d4fcc
28 May, 2021 2 commits
- faTools path fix · 50c0284b
  Nijsse, Bart authored May 28, 2021
  
  50c0284b
- unbinned contigs from assembly · e08a1d1f
  Nijsse, Bart authored May 28, 2021
  
  e08a1d1f
09 Apr, 2021 2 commits
- rsync call · b680c615
  Nijsse, Bart authored Apr 09, 2021
  
  b680c615
- changed output naming · 38257e05
  Nijsse, Bart authored Apr 09, 2021
  
  38257e05
30 Mar, 2021 1 commit
- time print commented · e7a7aad7
  Nijsse, Bart authored Mar 30, 2021
  
  e7a7aad7
25 Mar, 2021 8 commits
- Merge branch 'master' of git.wur.nl:unlock/scripts · a5133596
  Nijsse, Bart authored Mar 25, 2021
  
  a5133596
- removed time counters · df0f3427
  Nijsse, Bart authored Mar 25, 2021
  
  df0f3427
- removed time counters · 7db64ad3
  Nijsse, Bart authored Mar 25, 2021
  
  7db64ad3
- Merge branch 'master' of https://git.wageningenur.nl/unlock/scripts · 0a961892
  Koehorst, Jasper authored Mar 25, 2021
  
  0a961892
- other scripts · a9e4ea6b
  Koehorst, Jasper authored Mar 25, 2021
  
  a9e4ea6b
- add verbose to rsync · 68d0d6ac
  Nijsse, Bart authored Mar 25, 2021
  
  68d0d6ac
- removed last time counter · 10d26f97
  Nijsse, Bart authored Mar 25, 2021
  
  10d26f97
- samsa scripts · a3e8fbaa
  Koehorst, Jasper authored Mar 25, 2021
  
  a3e8fbaa
24 Mar, 2021 1 commit
- Initial commit · 9fb691ec
  Koehorst, Jasper authored Mar 24, 2021
  
  9fb691ec