Fix text overlaps in overview screen

Closes #11

See merge request !42

Fix overview screen only shows output from 1 run in the case of multiple runs via --cutoffs

See merge request !41

Added requirements.txt for easier installation using pip / conda

See merge request !40

HTML Visualization will now produce separate outputs for each cutoff specified in "--cutoff"

See merge request !39

- Gene and protein names will have colons in their names substituted by
underscores to avoid issues further on (colons are used internally to
split information contained in the sequences' header)
- Added a new bundle of MIBiG BGCs (version 1.4). Version 1.3 is still
kept for reproducibility

Family tab now explicitly mentions Clan-related information

See merge request !37

- Distance calculation modes are now 'global', 'auto' and 'glocal'

Genome accession parsing method now only considers "Organism" identifier within…

See merge request !36

Genome accession parsing method now only considers "Organism" identifier within a clustergbk file, if not found, it will use the gbk file name (excluding the 'clusterXXX' from antiSMASH run) as the Genome name

- Include only BGCs that contain a user-defined list of domain accessions. In
this case, the list is contained in the domain_whitelist.txt file (which
already includes an example). Toggle with --domain_whitelist

Added download button for downloading absence/presence table into a tab-separated tsv file

See merge request !35

improve heatmap color scaling for mibig metadata

See merge request !34

GCF with MIBiG are now shown in the overview screen's heatmap

See merge request !33

Fixed bug where incorrect BGCs where removed instead of the non-relevant MIBiG ones

overview screen now correctly counts input & mibig bgcs

See merge request !32

fix newick tree visualization error when GCF == 2 bgcs

See merge request !31

- Fixed incompatibility of recursive glob in Python 2
- Added parameter --label. Will be used in the network_file folder +
visualization dropdown run names
- Removed annoying warning message from last time we broke backwards
compatibility. You are always advised to re-run everything from scratch
while BiG-SCAPE is in pre-release development! But we'll announce loss
of backward compatibility here